Coturnix japonica (Japanese quail): 107312782
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Entry
107312782 CDS
T04297
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04510
Focal adhesion
cjo04512
ECM-receptor interaction
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107312782 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107312782 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107312782 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjo04147
]
107312782 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
cjo00536
]
107312782 (COL4A6)
Exosome [BR:
cjo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107312782 (COL4A6)
Glycosaminoglycan binding proteins [BR:
cjo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107312782 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107312782
NCBI-ProteinID:
XP_015715965
LinkDB
All DBs
Position
4:13120706..13232383
Genome browser
AA seq
1702 aa
AA seq
DB search
MGPAPGRTGALLLLPVLLLSLHAEPVSAGGKKFYSGPCGGRDCSVGCKCFPEKGARGRPG
PVGIQGPIGATGFTGPEGLPGAKGERGAVGPPGPAGHKGNKGSMGVPGFQGINGIPGHPG
QSGPRGPPGLDGCNGTIGSPGVSGPDGFPGIPGLPGRPGPKGLKGEPVFAQGSLKGMKGE
NGLPGLDGISGPKGLPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDV
GLPGPPGPPPSTGILEFMGFPKGKQGEKGQPGPQGLPGVKGLPGLPGFGGVGEKGEKGVP
GLPGGRGLLGLDGSNGIPGRKGHPGIPGYPGLDGVEGMKGEVGDIGPPGPPIIVDKEGVV
ISGAPGDPGNPGIPGPPGDEGLSGLPGFPGAPGFPGLERDGMGPGGSPGIPGVKGEMGEP
GRATVGLPGTPGRDGLPGLPGAPGLPGSSRPSFLPDGILDGRTGAPGEPGQRGLPGALGP
KGYKGDAGDCACDGGVTRAGLKGVSGPQGPPGSRGVPGIKGVSGDPGTVGAPGLRGPLAS
AGQQGLPGLKGEKGDPSYATGRGAPGDRGEAAPRGPSGFPGTPGRDGLPGLPGPPGPPGD
GGLGFPGEKGLPGLPGSKGRPGEIGAPGIGYPGPAGLRGPPGDPGMDGFPGQAGLPGPPG
ITLPCIVPGAYGPPGTPGLPGLPGPKGSKGFPGIPGQPGLNGSKGQPGSPGIIGLQGEPG
FPGPRGEQGSQGLPGLDGTDGLPGKMGPSGLAGIKGAPGDVFGAESGAQGERGRPGLSGD
KGPAGDLGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGS
VGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGTPGPPGERGFLGPPGPFGQDGR
PGFSGPKGEKGSTGLLGFPGMPGLPGVPGVNGFKGTPGTVGEKGSPGVLGLQGQKGDRGD
VGPPGLPVLGAQEQALQLKGDKGDPGLSGLGGFPGPRGDKGIPGSRGQPGLPGPVGSASR
ERGFHGDQGFPGPSGQPGLPGQKGARGIMGFPGMPGERGSDGITGTLGFPGPIGLPGPKG
DQGESTGVPGTAGVKGVRGDPGFPGERGREGLKGEPGYPGSTGVNGIKGGPGDLGQEGPV
GIPGNAGLRGISGPPGPPGPPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTP
GLSEVGLKGPAGLPGPKGEEGSPGLGRGAVGFPGPKGSSGDLGPPGPVGLPGLPGTPGVS
LPSDIRGRPGDAGHPGLDGSPGLPGTPGPRGPPGPAFDQGDTGSPGFPGVPGLRGGKGDV
GLPGPIGLPGISGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGQPGAPGIT
PQAEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGPKGLPGRSGSKGRDGLPGSPGI
AGDPGPLGAPGPQGFEGAAGKPGAIGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKL
WDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTA
PIPMMPVDSNQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAA
GAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVGAPPS
ETLKAGQLRTRVSRCQVCMKNL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggccccggggcgcacaggggcgctgctgctgctgccggtgctgctgctgagc
ctgcacgccgagccggtgagcgcgggtggaaagaagttttacagtgggccatgtggagga
cgcgactgcagtgttggatgcaaatgcttcccagagaagggtgcgaggggtcgacccgga
ccagttgggattcaaggaccgataggtgctactggatttactggtccagaaggtttgcca
ggagcaaaaggtgagagaggagcagtgggcccccctggaccagctggacacaaaggcaac
aagggttcaatgggagttccaggatttcaaggcatcaatgggatcccaggtcaccctggc
caatctgggcccaggggtccacccggcctcgatggctgcaatggaacaattgggagccct
ggtgtttctgggccagatggatttcctggcatacccgggctgccgggtcgtcctggccca
aagggccttaaaggagaacctgtttttgctcaaggcagccttaaaggaatgaagggagaa
aatggtcttcctggattggatggtatttctggccccaaaggtttgccaggtcctacaggt
tctgcaggccctataggattaccaggtttgcaaggtccggtgggtccccctgggccacca
ggtccgaaaggtaatatgggattaggctttcaaggagagaaaggagaaaaaggtgatgta
ggactgcctggccctccgggtccccctccatccactggaatactagaattcatgggattt
ccaaaggggaaacaaggagaaaagggtcagccaggccctcagggactgcctggagtcaaa
ggattgcctggactgccgggctttggaggtgttggagaaaaaggagaaaaaggtgtgcct
ggtttaccaggtggcaggggtcttttggggctggatggatccaatggcattccagggaga
aagggtcatccaggtattccaggctatccaggactggatggagttgaaggcatgaagggt
gaagtaggtgacattggtcccccaggccctcctatcattgttgacaaggaaggtgtagta
atttcaggtgccccaggtgaccctggaaacccaggaatacctggtcctccaggagacgaa
gggctcagtggtctaccaggctttccaggagctccagggtttccaggcctggagagagat
ggaatgggccctggagggtctccaggtattcctggtgtgaagggtgaaatgggagaacca
ggaagagcaacagttggattaccaggcactccaggaagagatggcttacctggtctgcca
ggagcaccaggattgcctggttcatcgcgcccttcgtttctcccagatgggatcctggat
ggaaggactggtgcaccaggggagcctggacaaagagggcttccaggagctttgggtcca
aaaggttacaaaggagatgcaggtgactgtgcttgtgatggaggagttacaagagcaggt
ctaaaaggcgtctcaggtccacagggtccaccaggaagtcgtggtgtgcctgggattaaa
ggtgttagtggagaccctggcactgtgggtgcaccaggactgcgaggccctctggcttca
gctggccagcaaggtcttccaggacttaagggagaaaaaggtgatccatcctatgcaaca
ggcagaggtgctcctggggaccgtggtgaagcggcacccagaggaccatcaggcttccca
ggaacccctggcagggatggacttccaggtttgccaggcccaccaggtccaccaggtgat
ggtgggctaggttttccaggtgaaaaaggtctaccaggattacctggctccaagggccgt
cctggagagattggtgcccctggcattgggtatcctggtcctgctggacttcgtgggcca
ccaggtgacccagggatggatggtttcccaggacaagcaggtctgccaggcccgccaggt
atcaccttgccctgcatagttcctggagcatatggtcctcctgggactcctggccttcca
gggctgccaggtcccaaaggcagcaaaggctttcctggcattccagggcagcctggatta
aatgggtcaaaaggacagccaggatctccaggaataattggcttgcaaggggaacctggc
ttccctggaccgcgaggagagcaaggatcacaaggacttccaggattggatggaacagat
ggtttgcctgggaagatgggtccttcaggcttagctggaattaaaggagctcctggagat
gtatttggtgctgagagtggagctcagggagagcgtggccgacctgggctgtcaggggat
aaagggcctgcaggtgatcttgggtttccgggaccaaaagggctggatgggagaccaggc
ctcctaggtattaaaggagagctgggtaatccaggatattcaggtgtccccggattgcgg
ggacctcctggtcctggaggtccttttggcattaagggaaaaccaggaccactgggatca
gttggccttgcaggagcgccaggctgtcaaggacttcctggagtcaaaggattgactggg
gatgtaggtcctcaaggccctgctggtatgaaaggtttcccaggtcttgatggtactcca
ggacctcctggtgaaagaggattcttaggaccacctggaccttttggtcaagatggacgt
ccaggtttctctggaccaaaaggtgaaaaagggtctactggcctgcttggtttcccaggc
atgccaggcctgcctggtgtccctggggtcaatgggtttaaaggaactcctggcacagtg
ggagaaaaaggaagccctggagttctgggacttcaaggtcaaaaaggtgacagaggagat
gtaggtccacctggtcttcctgttcttggggctcaagaacaggcactgcaattgaaagga
gacaaaggagatcctggattatctggactcggaggattcccaggacccagaggtgataaa
ggaatcccaggaagccgtggacagcctggtcttcctggacctgttgggtcagcaagcaga
gagagaggttttcatggtgaccaaggctttcctggaccgtcgggacagcctgggctgcca
ggacagaagggtgcacgtggtatcatgggatttccaggaatgccaggagagaggggttcg
gatggtatcacaggaacacttggattcccaggacctattggcctccctggtccaaagggt
gaccagggagagtctactggtgttcctggcactgctggagttaaaggagtgcgaggagac
ccaggattcccaggagagagagggagagaaggtctcaagggtgaaccaggctacccagga
agcactggagtgaatgggattaaaggtggcccaggagaccttggccaagaaggaccagta
ggaatacctggaaatgctgggctaagaggaatctctgggccaccagggcctccagggccg
ccaggatctgttggattcccaggagctcgtggaacagcaggaccaaaagggtttcatgga
tttccaggtttaaatggtctgaatggcttgccgggcacaaaaggatctcctggaacacca
ggtctgagtgaagtcggactcaaaggccctgcaggtctccctggtccgaagggtgaggaa
ggttctccaggtttgggtagaggagctgtaggattcccagggccaaaaggctcatcagga
gacttgggtcccccgggtcctgtgggactgcctggcttgccagggactcctggagtttct
cttccttctgatatacgtgggagacctggggatgctggccatccaggacttgatgggagt
ccaggtctcccaggtactccaggaccacgagggccccctggaccagcttttgaccaaggt
gacacaggcagtccaggtttccctggtgttcctggcttgcgaggtggtaagggtgatgtg
ggacttcctggtcccattggactccctggtatatctggattcaaaggtgtcagaggtgag
cctggtcttatggggatgccaggtaaagatgggcctccaggggatcctggttaccctggg
ctgaaaggtgaaatggggcgtcgaggtctccctggccaaccaggggctccaggtataacc
ccacaggcagaagaaatcacagcccctgcgggcttgccaggtctgccagggattgatggt
gtccctggctttgatggagatcctggattccagggcccagttggaaagccaggtccaaag
ggtctgccaggcaggtctggttcgaaaggacgtgatggtttacctggatcacctggcata
gctggggacccaggacctttgggtgccccaggacctcagggatttgaaggtgccgctgga
aagccaggtgccattggcttgccgggaatgccaggtcggagcgtgggtgtcgggtacacc
ttagtgaagcacagccagtcagaccaaatcccaccgtgtcccattggtatgaacaagctc
tgggatggctacagcttattgtacgtggaggggcaggaaaaatcgcacaaccaggatctc
ggttttgctggctcttgtttgcctcgcttcagcacgatgccttttatttactgcaacatc
aatgaagtgtgctactatgccagccgaaacgacaagtcctactggctgtccaccaccgct
cccatccccatgatgccagtggacagcaatcagatcccacagtacatcagtcgttgctct
gtctgcgaagcaccttcccaggctgtggctgtgcacagccaggatatcaccatcccacag
tgtcccctcggctggcgcagcctatggataggatactccttcctaatgcacacggcagct
ggtgcagagggtggaggtcagtcccttgtctcacctggttcttgcctggaggatttccgt
gctacgcccttcattgaatgcaatggtgccaggggaacatgccactactttgcaaacaaa
tacagcttctggctgaccactgttgagcagtcacagcagtttgttggtgctcctccctct
gaaactctgaaagcaggacagcttcggacaagggtcagccgctgccaagtgtgcatgaag
aacttgtaa
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integrated database retrieval system
