Coturnix japonica (Japanese quail): 107312923 Help Entry 107312923         CDS       T04297                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo03013   Nucleocytoplasmic transport cjo03040   Spliceosome Brite KEGG Orthology (KO) [BR:cjo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107312923 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     107312923 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cjo03019]     107312923 (THOC2)    03041 Spliceosome [BR:cjo03041]     107312923 (THOC2) Messenger RNA biogenesis [BR:cjo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      107312923 (THOC2) Spliceosome [BR:cjo03041]  Complex C   Other components    EJC/TREX     107312923 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     107312923 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  107312923 NCBI-ProteinID:  XP_015716234 LinkDB All DBs Position 4 Genome browser AA seq 1607 aa AA seqDB search MATMLPAEWIKNWEKGGRNEFLQLCRALSEDKSHDSLSFRDIQQALYELSSHVVRGNLKH EQASGVLADIIEFREDMPSILADAFCILDIETSCLEEKTKRDCFTQLVLSCLYLVSDTVL KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS IMDQMPPFYATSHKPIAIALCQLVHVTVEPLYRRVGVPKGAKGSPVSPLPNKKAPKQADS FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEAGTTKKFISDRMVKFQSDGSK QEDKEKMEVLFSCVLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKN ETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHANPTILFDYILSQIQK YDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAV FRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQL KAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKL YDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHQISSK YDELKKAEKGNKQQHKVHKYITACELVMAPVHEAVISLHPPKVWDDISPQFYATFWSLTM YDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHV QRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTP NFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPG FLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTK ILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHK DPPARNAVAATVQNGPGGAGMPTSLTINTAKLEESSAEETDKLKEKSQGTVKVINKTVNT TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKEKEKKEKIPATTPETKALGKDGKDKPKEE RANKDDKPREIKEKTPKSDKEKEKAKKEEKASKEEKSKTIVTTIESKSVAEKEREKEPSR EKDVAKDMKSKENTKGGEKIPVAGSLKSPVPRSEASECEREQKRRKVDIHSSPSHSSTVK DNLNELKDSSTKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDH SNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEREKSKSKSSGKEKGDSI KAEKMEKSSSGSKKESRHDKEKEKKEKRDSTGGKEEKKHHKSSEKHR NT seq 4824 nt NT seq  +upstreamnt  +downstreamnt atggcgaccatgctccctgccgagtggataaagaactgggagaaagggggcaggaacgag tttttgcaactatgtcgcgctctcagtgaagacaaaagccatgacagtctcagtttcaga gatatccaacaggctttatatgagctttcatctcatgttgttagaggaaacttaaagcat gaacaagcttctggtgttcttgctgacattatagaatttcgtgaggacatgccttccatc ttagctgatgcattctgcatattagacattgaaacaagttgtttagaggaaaaaactaaa agggattgttttactcagctggtgttatcctgcttgtatcttgtatccgatactgtcctg aaggagcgtttagatccagaaacactggagtcattaggacttatcaagcagtctcaacag ttcaaccagaaatctgtcaaaataaagacgaaactattttacaagcaacagaagtttaat ttattacgagaggagaatgaaggttatgcaaagctgattgcagaactgggtcaagacctc tctggaaatatcactagtgatttaatccttgaaaatatcaaatccttaataggatgtttt aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag tatgatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaacg ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct tcctccctctacagagttgctgctgtcctgttacaacataatctcatagatctggaagat ctttatgttcatcttcttccaggggataatgccatcattgaagaacacaagcgagagata gtggaagctaagcaaattgtgagaaaactcaccatggttgtcttatcctctgagaagact gaggaaaaggagaaggaaaaagagaaagaagaggagaaaactgagaagcctccagataac cagaagcttggtttattggaagctttattaaaaattggtgattggcagcacgcacaaagt attatggatcagatgcctccattttatgctacttcacataagcctattgcgattgccctt tgccagcttgtacacgtgacagttgaacctttgtaccgcagggttggtgtaccaaaaggg gctaaagggtcaccagtttctcctttgccaaataagaaagcaccgaaacaagcagacagc tttgaagacttgagaaaggaagtgttcaacatgctgtgctaccttggccctcatctctcc cacgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaagaggct ggaactacgaagaaattcatcagtgacagaatggttaagtttcagtccgatggaagcaag caggaagataaagagaaaatggaggtactttttagctgcgtgttgagtattaccgatcaa gttctgcttccttctctttctttgatggactgcaatgcgtgcatgtctgaagaattatgg ggaatgttcaaaacatttccataccagtaccggtaccgtctttatggacagtggaagaac gaaacatacaatagtcatccactcctagtaaaagttaaagctcaaaccatagaccgagcc aagtacatcatgaagcgtctaactaaggaaaatgtgaagccatctggaagacagattggg aaactcagccatgccaatcctaccattttatttgattatattttatcacaaatacaaaaa tacgataacttaataactccagttgttgattcactgaaatacctcacttcactaaattat gacgtcttggcatactgtatcattgaagctctggcaaaccccgagaaggagagaatgaag cacgacgacactactatctcaagctggctgcagagtctggctagcttttgtggtgctgtt ttcagaaaatacccaattgaacttgctggtctgcttcaatacgtagccaaccaattgaaa gctgggaaaagctttgatttgcttattttaaaggaggtagtacaaaaaatggcagggata gaaattacagaagaaatgacaatggaacaattggaagccatgactggtggagaacaacta aaagctgagggtggatactttggccaaattaggaatacaaagaagtcttctcagagactg aaggatgcgttattagaccacgatcttgcccttccactatgcctgcttatggctcaacag agaaatggtgtgatctttcaagaaggaggggaaaagcatctgaagctagtgggaaaactg tatgatcaatgccatgacaccctggtacagtttggtgggtttttagcatccaatctgagc acagaggattacattaagcgagtgccttcaattgatgttctttgtaatgagtttcacacg cctcatgatgctgcatttttcctttcaagacccatgtatgcgcaccaaatttcatccaag tatgatgaacttaaaaaagctgaaaagggaaataaacagcaacacaaagttcacaaatac attacagcatgtgaactggtgatggctcccgttcatgaagctgtgatctctctgcaccct cccaaggtttgggatgacatcagtcctcagttttatgccacattctggtctctgactatg tatgaccttgctgtcccacacagcagctatgacagagaagtcaataaacttaaagtccag atgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaa cgttgcactgctcttcaggacaagctccttgaagaggagaagaaacagctagagcacgtt caaagagttttacagagactgaaattagagaaggataactggcttctggcaaagtctacc aaaaatgagactatcacaaagtttttgcagttatgtatatttcctcgctgcattttttcg gcaatagatgcggtttattgtgctcactttgtagaactggttcatcagcagaaaacaccc aacttctccacacttctctgttatgatagagttttctctgatattatatatacagtagca agttgtactgaaaatgaagctagtagatatggcaggtttttatgctgtatgctggagacc gtgactagatggcacagtgacagagtcatatatgagaaggaatgtggcaactatccaggt ttcctaactatattacgagcaactggatttgatggtggaaataaagctgatcaattggat tatgagaattttagacacgtggtacacaaatggcactataagttaactaaggcttctgta cactgccttgaaactggtgaatatacacatatcagaaatatcctgattgtgctgaccaaa atccttccatggtatccaaaagtgttgaacctgggccaagccttggaaagaagagtacat aagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctat tctgggcagttgaaaagtaggaagccttttatgatacctgaaaatgaattccaccacaaa gacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctggg atgcctacatctctcacaataaatacagcgaaactggaggaaagctctgctgaagagact gataaactaaaggagaagtctcagggtactgtgaaagtcattaataaaactgtcaacact acaccaaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattattaaagag aaagatgataaagaaaaaagtgggaaggaaaaagagaaagaaaagaaagaaaagattcca gctaccactccagagacgaaggcacttgggaaggatgggaaagataaaccaaaggaagaa cgggcaaacaaagatgataagccaagagagattaaggagaaaacaccgaaatctgacaaa gagaaggagaaggccaagaaagaagaaaaagcttcaaaggaagaaaaatccaagacaatt gttacaaccattgagtcaaagtcagttgcagaaaaggagagagaaaaggagccatccaga gaaaaagatgtagcaaaggatatgaaatccaaggaaaatactaaaggaggagaaaagatt ccagtagctgggtccttgaagtctcctgttccccgatcagaagcatcagaatgtgagagg gaacaaaaacgccgcaaagttgatatccattcttctccatcacattcctcaacagtaaag gacaacctcaacgaactcaaggactcttcaacaaagcactacattaaccacactactcca acactgtccaagagtaaagagagagaagtggacaagaaagatttggacaagtcaagggaa agatccagagagagagagaagaaagaggaaaaggacaggaaagatcgaaaaagggatcat tccaacagtgaccgagaggtgccacaggattcaactaaacgacgcaaagaggaaaatggg acaacaggttcttccaaacatagtaaaagcgaaagtccttctgattctcctcgttcaaat gaaaaagagagggagaagagcaaatcaaaatcttcaggaaaagaaaaaggtgattcaatc aaagcagaaaagatggagaagagttcctctggtagcaaaaaggaatcaagacatgacaaa gaaaaagagaagaaagaaaaacgagacagcactggagggaaagaagaaaagaaacatcat aaatcttcagaaaagcacagataa

DBGET integrated database retrieval system