Coturnix japonica (Japanese quail): 107312939
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Entry
107312939 CDS
T04297
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107312939 (AFF2)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107312939 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
107312939
NCBI-ProteinID:
XP_015716280
LinkDB
All DBs
Position
4:complement(16822822..17166832)
Genome browser
AA seq
1269 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRNALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFSEQRNRMIP
SHQISGHSSTSMPPPLSLSSNSALLHSHQSSRKSRTDWSRSGHNSSGAQSSQSSSQQSRT
KHSSSHDQPQGRYEDLYNCQSEQHKSGGTEEANSMAASSHSRRHTHSKSAAGEHTYKDNS
HSKSPTELEFVGHGSGSPLPSTSLLSANSSLSNQNFPPGLHCKSSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVGEVTLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKVQDSQHLTSGYNVQKWSDPGGKV
ATKSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNTPVNGLPVSVAHAAGLAHSSGGSGS
SSESESSSESDSDSESSSSDSDCNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIIS
NQNEPHSETSSQPQSSQQTEGQNKGKLSNSLPPTDSKDRAILSPIREKAKPRVAQKTPEA
KSSKQKSPAHNEPTAQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQP
KVRTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEES
LQAKILPACSGPANGIKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQN
ELLSPLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKTEPRESNVKHRRPSRESPTPA
AEKTSTKSKRKHKSENLETLVESKKQRLEDPSASCLLPPCISPIPNHRLTSTKESSSNSV
KKMAKKREEKLFPPPLSPLLDEPVHRRHSSDNSSFSQETNITNTSQTSSSSSSVSKHRKN
ENKSSSNPKGIYEEETHNAPTANNLLDTNHLETDIWSAMPTLSNGNSEPRRPKITFDDVL
HNADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNALEKNAQESKSPFTMYSE
TVELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYF
KNSSKASQAPSPWGGNGKSTETPSPMSLSPSPVGSAGGSTGTTGSCSAGTITIPQRIHHM
AASHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLH
WLHIEAHLL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcag
gaccggaatgcacttaagcggaaggagtgggagagaagaaaccaggaagtccagcaagat
gaagacctctttgcttcaggttttaatctctttggggaaccctacaagacaaataaaggt
gatgctcttgcaaaccgtgtccagaacacattgggaaactatgatgagatgaaggacctg
ctaactaaccattccaatcagagccatcttgtaggaatcccaaagaattctgtcccacag
acgcccattgacaaaaatgaacagaactttttctcagaacaaagaaacaggatgatccca
tctcatcagatcagtggccactcatcgacatcaatgcctccacctttgtcactgtcatct
aattctgccttgctgcacagtcaccagagcagcaggaagtcgaggacagactggtcacgc
agtggtcacaactctagtggggcccagtcaagccaatccagtagtcagcaaagtcggaca
aagcatagctcttctcatgaccagccacagggcaggtatgaagacctctataattgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctatggcagcatcttcgcat
tcaaggcggcatactcattcaaagtcagcagctggagaacatacttacaaagacaacagt
cattcaaagtcacccacggagcttgagtttgtaggtcatggttctggatctccacttcct
tccacatctttgttgtctgcaaacagtagtctttcaaaccagaatttcccaccaggactt
cactgtaaaagcagcatggtccagcaaaagcctacggcatatgttaggccgatggatggt
caggaccaggtacccaatgactcaccagaactgaaacctcccatagaaattgagagtgga
tatggaaatcagtcctttggaacactgctggaaggaaaagtgaacacaccaagttcaaag
aataaagtaccaaagcttaatattcctcctgttggtgaagttacccttcctaatgactcc
agctgtgtggaagaaatattgcgtgagatgacccattcttggcctcctccgctgactgct
attcacactcctggaaaggctgaacagaccaagttttctatcccaagcaaggtacaagac
tcccaacatctgacctcaggatacaatgtacaaaagtggagtgatccaggagggaaagtt
gcaactaagtcagtgccacaaaagtcgatgcttgaggatgatctgaaactcagcagtgat
gaagatgacaatgaacaggctgctgaaaagacaaaattgagaaacactcctgtgaacggt
ttgccggtgtcggtggcacatgcagctggcttagcccattccagcggtggctctgggagc
tccagtgagtctgagagcagctccgagtctgactccgacagcgagagcagctccagtgac
agtgactgcaacgaggagtcacgcagtgccacgccagagccagaacccccctcaacaaac
aaatggcagctggataagtggctaaataaagtgaacccccacaacaagaccatcatcagc
aatcaaaatgagcctcacagtgaaaccagctcccagccgcagagcagtcagcagactgaa
gggcaaaacaaagggaagctcagcaacagcctgcccccaactgattccaaagaccgggca
atcctcagtcccatccgagagaaagccaaaccacgggttgcccagaaaaccccagaggca
aaaagctccaagcagaagtcaccagctcataatgagccaactgcacaaaggactactggg
aaaaagcaacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaa
ccaaataataccagcaacactcccaaagaaaaagacacgcaggaaccccctgagcagcca
aaggttcgaactaaagcagcagttggcaagaccgccccaaggaaggaacctcgaacaagc
acaggtctcacttcagagaagaaaaagtacagaggccccagcaaaattgtccccaagtcc
cgggaatttattgaaactgattcatctacttctgactcaaatacagatcaggaggagagc
ctgcaggctaagatattgccagcttgtagtggaccggccaatggcatcaaagtgaaggac
tctggcagtaacatcctcagcgtaagtagcttgactagcaatggcagcaacacatccatc
gaccagaccagcaatgacttggaggagcagctcttttctcctatcccaattgtacaaaat
gaacttctgtccccactgagagaatatgaagaactcaaatctctttgggtgaaaatagac
cttagtttactctctaggatacctggacaagagccttttgagaccacatctgtgaaaact
gaaccaagagagtcaaatgtgaaacacagacgaccatctcgagagtcccccaccccagca
gctgaaaaaacatccacaaaatcaaagaggaaacacaagtcagaaaacctggaaaccctt
gttgaaagcaagaagcagcgcctggaggacccttcagcttcatgcttgctcccaccttgt
atctctcccataccgaatcacagattaaccagcactaaagagagcagcagtaactcggtg
aagaagatggcaaagaaaagagaagagaagctcttccctcctccattatctcccctgttg
gacgagcctgtgcaccgtcggcacagcagtgacaacagctccttcagccaagaaaccaac
atcacaaacacctctcagaccagcagctcttcctcctcggtttctaaacacagaaagaat
gaaaataaatcctcttctaaccccaaaggaatctatgaggaagaaacccacaatgcacca
acagccaacaatcttcttgatacaaaccatctagaaacagacatctggtctgcaatgcca
actctttccaatgggaattctgagcccagaagacctaaaatcacatttgatgatgtgctt
cacaatgcagattattatatgcaagaagctaagaagctaaagcataaagcagatgcattg
ctggagaagttcggcaaagcagtgaattatgctgatgctgccctgtcattcattgagtgt
gggaatgcattggagaaaaatgctcaggaatccaagtccccgttcactatgtattcagaa
actgtggaattaatcaggtatgcaatgagactcaagaatttcacaggctcttctgccaca
gaaggggacaagaaactagcagttttatgctaccgatgcttatcgcttctgtacttgaga
atgtttaaactaaagaaggaccatgctatgaagtactccagatctttgatggaatatttt
aagaactcttcaaaagcctcacaggccccctcaccttggggcggcaatggaaagagcaca
gaaacaccgtcgcccatgtccctgagtccatcccctgtcggctctgctggaggcagcaca
ggcaccactggctcctgctcagcagggaccatcaccatccctcagcgtatccaccacatg
gctgccagccacgtcaacatcaccaacaatgttctgcgaagctacgagcactgggacatg
gctgacaagctgactaaggagaataaagaattctttgtagacctggactcagtgatggga
cccttaacacaacacagcagtatgaccaatctggttcgttacgttcgccaaggactccac
tggctccacattgaggctcatttgttgtag
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