Coturnix japonica (Japanese quail): 107313148
Help
Entry
107313148 CDS
T04297
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107313148 (LRBA)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Others
Others
107313148 (LRBA)
Endosome - Golgi transport
107313148 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107313148 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
DUF4800
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
SUKH_6
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
107313148
NCBI-ProteinID:
XP_015716603
LinkDB
All DBs
Position
4:complement(28934025..29280605)
Genome browser
AA seq
2878 aa
AA seq
DB search
MASDGKQVVRPTGDGGGGAGKEGNAAEGGSALQPLNPGVPIRGIRMKFAVLVGLVEVGEV
SNRDIVDTIFNLLVGGQFDLEMNFIIQEGEGITCMVELLDKCDISCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVLKTIDRADNMIADLLVEMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTNDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSVQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLSFIMELLKNSIAMQDQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHNGVPLLKQLCDHILLNPAIWIHIPAQVQLILYTYLSTEFIG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGVDGPRPTQKEILSLRAFLLM
FIKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LQVVYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLHTNLIT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNSPQSPETLEIRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQGKGGDGSVMCPSAPIRTISG
AGKGAEIVEKNQCLELKEAATAPPFHDDMESVTEKNESEADQKTLSASKQRKGSKDEDRD
EDREEAVPYSELSPEPEAIKPSVSEISSGIAEAIEDSLSKDHELVEETVAVTSASLVMET
SLEGEIHESPGGMERSAVEVEDEDDFVDLKEESSMPLPSEEFAETDRKHSSNENQETKQE
KATQQQLESVLLKSEGTGGVDVQNEDLALSETVSSAAEVENQPNSEGKKKMEEEKVLYSE
SGTDTNAHIPDHAGSSEKRIARLDVSSVASDTERLELKANTRLEAPLAHRSLPERYLLMD
ALHSAPFFLKGGKTLSTATYTLPVMSRQQDSSGQELAAISDGQRRESRSTVFRIPEFKWS
LMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMAC
GGILPLLSAATSATHELENIEATQGLSVEASLTFLQRLINLVDVLIFASSLSFTEIESEK
NMSSGGILRQCLRLVCAIAVRNCLECQQHAQMKPIGDTAKNQKAMQGFIGAGRSAAKSPV
DIVTGGISPIRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRD
ILEPQNERRPPNHSQSFKESENENNGTSAADVEHPSATLGAFTSASTEESECTASVQRRD
SGLGEEPTSEQTNSSGGAAEAGALSVSAGPDAVSEVLCTLSLEVNKSQGDRVETGAEDSK
SSASVPAAKNVNVKDILRSLVSTPADGTAVDPTLLPPAFLGVLGDGAAEHPVQFHSFDRS
VVVPPKKSNISSTTAAMGIPANAVSVVSSLDSAQAPDLSGESPGRRSSSSKLPSVPTVSS
VPEDSASNMSITDRLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMK
SSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHIVRVANEAEFILNR
QRAEDVHKHAEFESLCAQYSADKREEEKMCHHLITAAKYRDQVTATQLIQKIVNILTDKH
GAWGSSAPSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAGEHAPDEDILVKG
KQSIKSQALGNQNSESEILLEGDDDITSFIEEREVENLTGPVALSAPAQLVAPSVVVKGT
LSITLSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFSEIRAIFSRRYLLQNTALEIF
MANRVGVMFNFPDQATVKKVVNCLPRVGIGATFGLPQTRRISLASPRQIFKASHMTQRWQ
HREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESDELDLTLPSNFRDLSKPIGAL
NPKRAVFYAERYETWEDDQVPKFHYGTHYSTASFALAWLLRIEPFTTFFLNLQGGKFDHA
DRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPW
AKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAARSLNVFYYLTYEGAVNLS
SITDPVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMV
LKFPSNSPVTHVAANTQPGLTNPAVITVTANRLFALNKWHNLPAHQGAVQDQPYQLPVEI
DPLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLM
QVIFGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKTNIVGDNPRGDFATPRA
ILTGHDYEITCATICAELGLVISGSKEGPCLIHSMNGDLLRTLEGPETLEGPENCLRPKL
IQASREGQCVIYYENGLFCVFSVNGRLQATMETEDKIKAIQLSRDGQYLLTGGDNGVVMV
WQMWDLKKLFAYPGCDAGIRSMALSYDQRCILTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8637 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacggcaaacaagttgtgcggccaacaggtgatggcggaggaggagcgggg
aaagaaggaaacgccgccgaagggggaagcgcgctgcagccgctgaatccaggggtcccc
atccgaggcatcaggatgaagtttgccgtgctggtggggctggtggaggttggagaggtg
tccaacagagacatcgtggataccatattcaatctgcttgttggaggccaatttgacttg
gaaatgaactttatcatccaagaaggagagggcattacctgcatggtagaactgttggat
aaatgtgacatctcctgtcaggctgaggtgtggagcatgtttacagcaatattgaaaaaa
agtatacgcaatctacaagcatgcacagaagtgggactggttgaacaagtgctcaagacg
attgatagagctgacaacatgattgcagatctcttagtggagatgctgggagtgttggct
agctacaatttgacggttcgagagctaaagttattcttcagcaaacttcaaggagaaaaa
ggaagatggccaccacatgctgggaaattgttgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccctatcagaatggatttacttttcacacttggttaagaatggat
cctgtaaacaatatcaatgtggataaggataagccatatttatattgttttcgaacgaac
aaaggacttggctattctgctcactttgttggtggctgcttgattgtaacatccataaaa
tcaaagggaaaaggttttcagcattgtgtaaaatttgatttcaagccacaaaagtggtat
atggttactattgtgcacatctataaccgctggaagaatagtgaacttcgatgctatgtg
aatggggagctggcatcttatggagaaataacatggtttgtcaacaccaatgatacattt
gacaaatgtttcctgggttcctcagaaacagcagatgccaatcgagtgttttgtgggcaa
atgacatctgtgtacctttttagcgaggctctcaatgctgctcagatctttgccatttat
cagcttggactgggatataagggaacattcaaattcaaggcagaaagtgatctcttcctt
gatgaacatcacaaattgttgctgtatgatggcaagctgtccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctctgtctagagtcatcccctaaagataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagccgtgttgaca
cattctgtccaaagtgctttgcactccattggaggagtgcaggtacttttccctctcttt
gcacagctagactataggcaatattcatcggaccacattgacacgactgtctgttctact
ttgttgtcttttattatggagttgttgaagaactcgattgctatgcaagatcaaatgctt
tcctgtaagggcttccttgtgataggatatagcttggaaaagtcttccaaagctcatgtt
acccgagctgtactagagctatgccttgcattttctaagtatctgagcaacttgcacaat
ggggtgcccttgctgaaacagctatgtgatcatattctccttaatcctgcaatatggatt
catatcccagcacaggttcagctgatcctgtacacttacctgtctactgagttcattggc
actgttaacatatatggcgcaattagacgggttgggacagttcttttggtcatgcatacc
ctgaagtattattactgggtagtgaatcctcaagatcgcagtggtataactcccaaaggt
gtagatgggccacggcctactcaaaaagagattttatctctgcgagcatttttgttgatg
ttcattaaacaactagtgatgaaggactatggaataaaagaagaagaattgcaggcaatc
ctcaattatctgctcactattcatgaggatgacaatctaatggatgtcctgcagttgctt
gttgctctcatgtcagagcacccaagttctatgatccctgcttttgatcagaggaatgga
ttacaggtcgtctacaaacttttggcgtcaaaaagtgaaggcatcagggtgcaagctctg
aaagtgatgggatatttcttaaagcatcttgctcctaagagaaaagctgaaatcatgctt
ggacatggattgttttcattgctagctgaaaggctgatgcttcatactaacttgatcacc
atgaccacatacaatgtcttatttgagattctgactgaacagatatgtactcaagtgata
cataaacagcatcctgacccagattcaacggtgaagatacaaaatcctcagattttgaag
gttattgcaatcctgctacgtaattctccacagagtccagaaacattggagattcggcga
gcctttctctcagatatgattaaactttttaataacagcagagaaaataggaggagtttg
ttgcagtgctccgtttggcaggagtggatgctttctctgtgctgttttaatcccaagact
tctgaggagcagaagataactgagatggtgtataccatttttcgaattttgctttaccat
gctatcaaatatgagtggggcggctggcgtgtttgggtggatacactgtctatcacacat
tcaaaggtaacctttgaaatgcacaaagagagtctttcacaaatgtacaaggaataccaa
gggaagggaggtgacgggagtgtaatgtgtccttcagctccaattagaacaatttctgga
gctggcaaaggagctgaaattgtggaaaagaatcaatgtttagaattaaaagaagctgct
actgctcctcccttccatgatgatatggagtctgttactgaaaaaaatgaatcagaagct
gaccagaaaactctttcagcctctaagcaaaggaagggctcaaaggatgaggacagggat
gaggacagggaagaagcagtgccttattcagagctttctccagagccagaagcaataaaa
cccagtgtttcagaaattagtagtggaatagctgaagcgattgaagattctcttagcaaa
gatcatgagcttgtggaggaaaccgttgctgttacttcagcttctttggtaatggaaact
tctttggaaggagaaattcatgaaagtccaggaggaatggaaagatcagcagtggaagtg
gaagatgaagatgactttgttgatttaaaagaggagagtagtatgcctttaccttcagaa
gagtttgcagaaacagacagaaagcatagctctaatgaaaatcaagagacaaagcaggaa
aaggcaacacaacagcaacttgaatctgtgcttttaaaatctgaaggtaccggaggtgtg
gatgtgcaaaacgaagatctagctttatcagaaacagtcagttctgcagctgaagtagag
aatcaaccaaattcagaagggaaaaagaagatggaggaagaaaaggtgctttatagtgaa
agtggaacagataccaatgcacatataccagaccatgcagggtcctctgaaaaaagaatt
gccaggcttgatgtttctagtgttgcatctgatacagaaagactggaactgaaagccaat
acacgtctagaagcacctcttgcccacagatccctacctgagagatacctgttaatggat
gctcttcattctgcaccattcttccttaaaggaggaaaaacactctctacagcaacatat
actcttcctgtgatgtcaaggcagcaagattcttcaggacaagagctagctgctatatca
gatgggcagagaagagaatctagatcaactgtgttccgtattcctgagtttaagtggtca
ctgatgcatcagcgcttgcttacggacttgctcttttccattgaaacagatatacagatg
tggagaagtcattctacaaaaactgtaatggactttgtgaatagcagtgacaatgtcata
tttgtacacaatacaattcacctcatctctcaagtgatggacaacatgatcatggcttgt
ggtggcatattgccacttctttctgctgccacatctgctacacatgagttggagaacatt
gaggccactcaaggactttcggttgaagcttctttaacatttctccaaagattaattaac
cttgtagatgtgttaatttttgcaagctctcttagtttcactgaaattgagtctgagaaa
aatatgtcatctggaggaattctacgacaatgtcttcgtttggtatgtgccatagcagta
agaaattgcttggagtgtcagcagcatgcacagatgaagccaattggagacacagcaaag
aatcaaaaagcaatgcaggggtttataggagcaggaaggtctgcagcaaagagtccggtg
gacattgtgacaggtggaatttctccaatacgagaccttgacagacttctgcaggacatg
gatattaacagacttcgagcagtagtgttcagagatatagaggatagtaaacaggctcag
ttcttggccttggcagttgtatattttatttcagtactcatggtttcaaaatacagagat
attctggaaccccagaatgaaagaagaccaccaaaccacagtcagtccttcaaggaatca
gagaatgaaaataatggaacttctgctgcagatgtggaacatccatctgctactcttggt
gcttttacttcagcttccactgaagagtcagagtgtacagcatctgtacaaagaagggac
tctggtcttggagaggaaccaacttcagagcaaacaaacagttcgggtggtgctgctgaa
gcaggagcactgagtgtcagtgcaggtccagatgctgtcagtgaagtactttgcaccctg
tccttggaagtaaataagtctcagggggacagagttgagacaggagcagaggacagtaag
tcttcagcttctgtgccagctgcaaaaaatgttaatgtaaaggacatcctgagaagctta
gtaagcacaccagctgatgggactgcagttgatcctactcttctgccaccagcctttctt
ggagttcttggtgatggagctgctgagcatcctgtacagttccattcctttgacaggagt
gttgtagtaccaccgaagaaatcaaacatttcctctactacagctgctatgggtattcct
gcaaatgctgtcagcgtggtttcttctttagattctgcgcaagccccagatttgtcagga
gaatctcctggaaggcgatcatctagttcaaaactgccatctgtccctacagtttcttca
gtgcctgaggattctgcttcaaatatgagcattacagacagacttgaacatgctttggaa
aaagctgccccacttctgagagagatttttgtggattttgctccctttctttctcgaact
cttttgggcagccatggacaggagttgttgatagaaggtacaagccttgtatgtatgaaa
tctagcagctcagttgtggagctggtgatgcttctttgctcacaggagtggcagaactcc
atacaaaagaatgctggccttgcctttatagaacttgtcaatgaaggaaggttgttgagt
cagactatgaaagaccatatagtgcgtgttgcaaatgaagcagaatttattttgaaccga
caaagagctgaagatgtccacaagcatgctgagtttgagtcactatgtgcccagtactct
gctgacaaacgtgaagaagaaaaaatgtgccatcatttgataacggcagctaagtaccga
gaccaagtgactgcaactcagttaatacagaaaattgtcaacattcttacagacaagcat
ggagcatggggaagctctgcgccaagtcgtcctcgtgagttctggcgccttgactactgg
gaagatgacttgcggcgccggcgacgatttgtgcgtaaccccctcggatcgacacatcct
gaagcgacactaaaagcagctggagaacacgctcctgacgaagatatacttgttaaggga
aagcagtctatcaagagtcaagccttaggaaatcagaactcagaaagtgagattctctta
gaaggcgacgacgatatcacatcattcattgaggaaagagaagtggagaacctaacgggt
ccagtcgccctgagtgcgccagctcagctggtggcaccctcggtggtggtaaaaggcact
ttgtccatcactctttccgagctctacttcgaggtggatgaagaagatcccagttttaag
aaaatcgacccaaagattctggcatatacagaaggactccatggaaaatggctcttttca
gagattcgagctatcttttcccgacgctatcttttgcaaaatacagctctggagatattc
atggcaaatagagtgggtgtcatgttcaactttcctgaccaagcaacagtgaagaaagtg
gttaattgtctacctcgggttggtattggggctacctttggactacctcagaccagacgc
atttctttggctagtccacgacagattttcaaagcttcccatatgacccagcgatggcaa
caccgagaaatttctaactttgaatacctgatgtttttaaacacaatagcaggtcgcact
tacaatgatttaaatcagtaccctattttcccttgggttcttaccaactatgaatcagat
gagttggaccttacacttcctagcaacttcagagatttgtcaaagcctattggagctttg
aacccaaagagagcggtattctatgcagaacgttatgaaacatgggaagatgatcaagtt
ccaaagtttcactatggtacacattattcaactgcaagctttgcactcgcatggttatta
agaattgaacccttcacaacatttttcctaaatctacaaggtgggaagtttgatcatgct
gatagaaccttttcatctatttcaagagcatggcgaaacagtcagcgtgacacttctgat
atcaaggaattgattcctgaattctattacctcccagagatatttgtcaacagcaacaat
tacaatctaggggtgatggatgatggaacagttgtgtctgatgttgaacttccaccatgg
gccaaaaccccagaagaatttgttcgtataaacagactggcattagaaagtgagtttgtt
tcctgccagcttcaccagtggattgatctgatttttggctacaaacagcaagggccagag
gctgccagatccctgaatgtattctactatttgacgtatgaaggagctgttaatttaagt
tcaataacagatcctgtattgagagaggctgttgaagctcaaatacgaagttttggacag
accccttctcaactgctcatagaaccacatcctccaagaagttctgccatgcaggtgtat
ctcctcctgcagagcccgttgatgttcacagaccaagctcaacaggatgttatcatggtt
ctaaagttcccatccaactcccctgtcactcatgtagcagccaacacccagcctggtctg
accaatcctgctgtgatcacagttactgcaaataggctatttgctttaaataagtggcat
aatcttcctgctcatcaaggtgctgtacaagaccagccttaccagctgccagtggaaatc
gatcctctcatagccagcaatacaggtatgcacagaaggcaaatcactgacctcttagac
caaagtattcaggtacattcccagtgttttgtcatcacctctgacaatcgttatatcttg
gtttgtggcttctgggacaagagtttccgagtttattctactgactcaggtaaactgatg
caagtaatatttggacactgggatgttgtcacctgtcttgctcgttctgagtcatatatt
ggaggaaattgttacattctgtcagggtcacgtgatgcaacattgctgctctggtactgg
aatggcaaaaccaatatcgttggtgataatccaagaggtgattttgcaactcctcgagcc
attttgacaggacatgactatgagatcacctgtgctaccatatgtgctgaactcggctta
gtaataagtggttcaaaagaaggaccatgtctcatacattctatgaatggagatttgctg
aggacattagaaggtcctgaaacattagaaggtcctgaaaattgcctgagaccaaaactt
attcaagcttcaagggaaggacaatgtgtcatatattatgaaaacggccttttttgtgta
ttcagtgtgaatgggagacttcaagccactatggaaacagaagataagatcaaggcaatc
cagctgagtagagatggacagtatctgcttacaggtggagacaatggagttgtcatggta
tggcagatgtgggacctgaagaagctttttgcttacccaggctgtgatgctggaatccga
tccatggccctgtcatatgaccaaaggtgcatactgaccgggatggcatcagggagcata
gtggttttctacaatgacttcaatcgttggcatcatgaatatcaaaccagatactga
DBGET
integrated database retrieval system
