Coturnix japonica (Japanese quail): 107313158
Help
Entry
107313158 CDS
T04297
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107313158 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107313158 (SMARCA5)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107313158 (SMARCA5)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107313158 (SMARCA5)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107313158 (SMARCA5)
RSF complex
107313158 (SMARCA5)
WICH complex
107313158 (SMARCA5)
B-WICH complex
107313158 (SMARCA5)
NORC complex
107313158 (SMARCA5)
BRF complex
107313158 (SMARCA5)
NuRF complex (fruit fly)
107313158 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
107313158
NCBI-ProteinID:
XP_015716620
UniProt:
A0A8C2ST95
LinkDB
All DBs
Position
4:26871583..26893630
Genome browser
AA seq
1035 aa
AA seq
DB search
MSAGQQGTPPPDEPPAPPGAGGGEASGTAAAGTAGADAAMEESFNDASPGKPKEISEADP
TYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSV
GDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENG
INGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAV
CLIGDKDQRAAFVRDVLMPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQ
KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA
GKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQ
GSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIV
ERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDHIL
ERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGY
KVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKM
DGTPDGRGRKKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagcagggaacgccgccgccggacgagccgcccgcgccgccgggggcc
ggaggcggagaggcctcgggaacggctgccgccggcactgccggagccgacgccgcgatg
gaggaatcttttaatgatgcatcaccaggaaaaccaaaagaaatctctgaagcagatcct
acatatgaagagaaaatgcaaacagacagagcaaacagatttgagtatctgttgaagcag
actgagctgtttgctcacttcattcagcctgctgctcagaaaactcctacttcacctttg
aaaatgaaaccaggacgtccgcgaataaagaaggatgaaaagcagaacttgctgtcagtt
ggcgactatcgccatcgtagaacagaacaggaagaagatgaagagctgttaacagaaagc
tccaagacaacgaatgtctgcactcggtttgaagaatctccatcatatgttaaatgggga
aagctgcgtgattatcaggtccgaggattgaactggctcatttctttatatgaaaatggc
atcaatggtatcctagcagatgaaatgggtcttgggaagacactgcagacaatctctctg
cttggatatatgaaacactacagaaatattcctggtcctcacatggtgttagttcccaag
tccaccctacataactggatgaatgagttcaagagatgggtacctacgcttcgagcagtg
tgtttgataggtgacaaagaccagcgagctgcctttgtcagagatgtgctgatgcctggt
gaatgggatgtttgtgtaacatcgtatgaaatgcttatcaaagaaaaatcagtattcaag
aagtttaactggagatatctagtcatagacgaagcccacagaattaaaaacgaaaaatca
aagttatcagaaattgtgagagaattcaagactacaaatcggctgctcctaactggaact
ccacttcagaacaacttgcatgaactctgggcacttcttaacttccttttgccagatgtc
tttaattcatctgaggactttgactcatggtttgatacgaacaactgtctaggggatcaa
aagttggtggaacgtctccatatggttttacgaccattccttttacgtcgcattaaagct
gatgtagagaaaagtttacctccaaagaaggaagttaaaatttacgtgggtctcagcaaa
atgcaacgagaatggtatacaagaatcttaatgaaggatatagatattttgaattctgct
ggaaagctggacaaaatgagactgctgaatatcctgatgcaactgcgaaaatgttgcaac
catccctatctctttgatggagcagaacctggtccaccttacacaacagatatgcattta
gtcaccaacagtggcaagatggtagtactggacaaattactaccaaagctgaaagagcaa
ggttcacgagtcttaatcttcagccagatgaccagagttctggatatcttggaagattat
tgcatgtggcgaaattatgaatactgtagactggacggacaaacgcctcacgacgaaaga
caggcttctattaatgcgtataatgaacctggtagctcaaaatttgtcttcatgttgagt
acacgggcaggaggtcttggaatcaatttggctactgctgatgttgtaattctgtatgat
tcagactggaatccacaagtagatcttcaggctatggatcgagctcacagaattggtcaa
acaaagaccgtaagagtgttcagatttatcacagacaatacagtggaagaaaggatagtg
gagcgtgcagagatgaagctccgccttgattccatagtcattcagcaaggaagactggtg
gatcaaaatttgaataaacttgggaaggatgaaatgctgcagatgatcagacatggagcg
acacacgtgtttgcctccaaggagagtgagattacagatgaagatatagatcacattttg
gaaagaggtgcaaaaaagactgcagaaatgaatgaaaaactctctaagatgggtgaaagt
tcactcaggaatttcacaatggatacagaatccagcgtatataattttgaaggggaggac
tacagagaaaaacagaagatggcatttacagagtggattgagccccctaaacgagaaagg
aaagccaattatgctgtggacgcttactttagagaggctctgcgagtcagtgagccaaaa
gctcccaaggcaccacggcctccaaaacagccaaatgtacaggactttcagttctttcct
ccacggctctttgaactactggaaaaagagattctctactacaggaaaacaattggatac
aaggtacctcgtaatcctgatcttccaaatgcagcccaagcgcaaaaggaagagcagctt
aagattgatgaggctgaacctcttaatgacgaagaactagaagaaaaagagaagcttcta
acccagggatttaccaactggaataagagggattttaaccagttcatcaaagctaatgag
aagtggggccgtgatgatattgaaaatatagcacgagaagtagaaggaaaaaccccagag
gaagtaattgagtattcagctgtgttctgggaaaggtgcaacgaactccaagacatagag
aagatcatggctcagatagaaagaggagaagccagaattcagagacgaatcagcataaaa
aaagcacttgacacaaagattggcagatacaaagcccctttccaccagctgagaatatcg
tatggtactaacaaagggaagaattacactgaagaggaagatcgctttttaatctgtatg
cttcacaagcttggatttgataaagaaaacgtctatgatgagttaagacagtgtatccga
aactccccccagttcagatttgactggtttctcaagtctagaactgcaatggagctacaa
aggagatgcaatactttaatcaccctgattgaaagagagaacatggaactggaagaaaag
gaaaaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatg
gacggcactcctgatggtcgtggaagaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
