Coturnix japonica (Japanese quail): 107313161
Help
Entry
107313161 CDS
T04297
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107313161 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107313161 (USP38)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107313161 (USP38)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107313161 (USP38)
Ubiquitin system [BR:
cjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107313161 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
DUF6221
Motif
Other DBs
NCBI-GeneID:
107313161
NCBI-ProteinID:
XP_015716628
UniProt:
A0A8C2SP41
LinkDB
All DBs
Position
4:26715601..26735965
Genome browser
AA seq
1036 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRRVVELAETPLSQAQCRAMFALGTRLVLQGPDAFQRQV
GRQVLEAYGRYHRTEFEAFFDKGLVLGLLQRGYGELSCRDPAILDYIQAGLRLIMSCPSV
LELFELLQVEALRMVCERPAPPLCARLCQLLGDFPQCLPRGRKLSLAFCQQLVRSIAHFQ
SQGNCEAELRLYVSQVTQVSGLLRSVWKAEPDTLLPSLQELFAVIAAADTSFEPSVALAS
LVQHIPLQMITVLIMSLTTDPNVKDASMTQALCRMIDWLSWPLAQNVETWVIALLKGLAA
VQKFTILIDVTLMKIEMVFNRLLFPLVRPGALAVLSHMLLSFQHSPEAFHLIAPRVVSLV
HSFRSDGLPSSTAFLMQFAELMHCMMYHYSGFPELYEPIMEVFKDMPKPSEEKMKLILSQ
SAWTSQSNSLPSCLSRLSGKSETGKTGLINLGNTCYMNSVIQSLFMASDFRRHVLSLNLN
GCNSLMRKLQHLFAFLAHTQREAYAPRIFLEASRPPWFTPQSQQDCSEYLRFLLNRLHEE
ERTLKALSSAKSAESRKNEESQAQETVHKAQVFAEALCKGSEERTLIERMFGGKLKTTIC
CLNCKSTSQKEEAFTDLSLAFCPPTSLESTSVKCVEHSEVKDGSVVQTSTSATSAGETPL
SSLEINGGCNTITNEGTLKDFSAEPNSETKSEFDKDQDNRNVSSVLVGKNTPSVTDLLNY
FLAPEILSGDNKYHCEKCASLQNAEKTMQIVEEPEYLILTLLRFSYDPKCHIRRKILDSV
SLPLLLELPVKRATSPLAVVSGSWSVDVEISDIGENLAKKLKPSGADEVSCPQLVPYVLS
SVVVHSGVSSESGHYYSYARNVTGSDSSGQCHQSKAFSLISPQNKLLAEESPCTVIENEL
DTEMPKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLIYKKQNSTCGYNTNSANGLWV
NGDPPLQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPA
GGGGGGGFSTVGRLVF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggaggggctggtgagctcgtcccacccgctgccgctgaagcgcgtc
atcgtgcggcgggtggtggagctggccgagacgccgctgagccaggcgcagtgccgagcc
atgttcgcgctcggcacccggctggtgctgcagggccccgacgccttccagcggcaggtg
ggccgccaggtgctggaggcttacggccgctaccaccgcaccgagttcgaggcctttttc
gacaaggggctggtcctcggcctcctgcagcgcggctacggcgagctgagctgtcgcgac
ccggccatcctggactacatccaggcggggctgcggctcatcatgagctgcccgtcggtg
ctggagctcttcgagctgctgcaggtggaagcgctgcggatggtgtgtgagcggcccgcg
ccgccgctctgcgctcggctctgccagctgctgggcgacttcccgcagtgcctgccccgc
ggcaggaagctctcgctcgccttctgccagcagctggtgcgcagcatcgcccacttccag
agccagggcaactgcgaggccgagctgcgcctctacgtctcgcaggtgacgcaggtcagc
gggctgctgcgcagcgtctggaaggccgagcccgacacgctgctgccctccctgcaggag
ctcttcgccgtcatcgccgccgccgatacttcatttgaaccctctgtcgcgctggcaagt
cttgtgcagcatatacctttacagatgattacagtactcatcatgagccttactacagac
ccaaatgtgaaagatgcgagtatgactcaagcgctgtgcagaatgattgactggttgtct
tggcctctggctcagaatgtggaaacgtgggtgattgcattgctgaaaggactagctgca
gtccagaaatttactatccttattgatgtcactctgatgaagattgaaatggtcttcaat
cgacttttgtttcctttagtaagacctggtgcccttgctgttctttctcatatgttactt
agtttccagcattctccagaagcttttcatttgattgccccgcgtgtggtcagcttggtt
cactccttcagaagtgatggcttaccttccagcacagcttttttgatgcagtttgctgag
ctgatgcactgtatgatgtatcattattcaggttttccagagctctatgaacccattatg
gaagtttttaaggatatgcccaagcccagcgaggaaaaaatgaagctgattctcagtcag
agtgcctggacttctcaatccaattctttgccatcttgtttatctagactttctggaaaa
tctgaaactgggaagacgggcctgattaacttgggaaacacttgctacatgaacagtgtc
attcagtctctcttcatggcttcagatttcagaagacatgttttatctctgaatctgaat
ggttgtaattcgttgatgagaaaattacagcatctttttgcgtttttggcccatacccag
agggaagcatatgctcctagaattttccttgaggcttccagaccgccatggttcacccct
caatcacagcaggattgctcagaatatcttcggttcctgctcaataggctgcatgaagaa
gagagaactttgaaagcattgtcttcagcaaagtctgctgaaagtaggaagaatgaagag
tcccaggcacaagaaactgttcataaagcacaagtatttgctgaagcactttgtaagggg
agtgaagaaagaactctcatagagagaatgtttgggggaaaactgaagactactatatgc
tgtttgaactgcaaaagcacatctcaaaaggaggaagcttttacagatctctctttggct
ttctgtcctccgacatccttggaaagcactagtgtgaaatgtgtggaacattctgaagta
aaagatggctctgtggtgcaaactagtacttcagcaacttctgctggagaaacccctcta
agtagtttggaaatcaatggtggatgcaacacaattacaaatgaaggaaccctaaaggat
ttttctgctgagccaaactctgagacaaaatctgaatttgacaaggatcaagataatagg
aatgtttcttctgtactagtaggaaaaaacaccccatcagtaacagacttattgaattat
tttctggcacctgagatccttagtggagacaataagtaccattgtgaaaagtgtgcctct
ctacaaaatgctgagaaaactatgcaaatcgttgaggaacctgaatacctcattctcact
cttctgagattttcatatgatccaaagtgtcatatcagacgtaaaatcttggacagtgtt
tctctgccacttcttttagaactgccagtcaaaagagcaacatcccctttagctgtggtt
tcaggaagttggtctgttgatgttgagatttctgatattggagaaaatcttgctaaaaaa
ctaaagccctcaggtgctgatgaagtgtcctgcccacagctggtgccctatgtgctaagt
tctgtggttgtgcactctggtgtatcctctgaaagtgggcattactattcatatgctaga
aatgttactggttcagattcttcaggacagtgtcaccagtctaaagcattctctttaatt
tctcctcagaataagttgttagcagaggagagtccctgtactgttatagaaaacgagctg
gacactgaaatgccaaaagagtggtttttattcaatgacagcagagtgacatttacctca
tttcagtcagtccagaaaattaccagtaggtttccaaaggacactgcttacgttctgatt
tacaaaaaacaaaatagtacctgtggctacaacacaaattcagcaaatggactctgggtg
aatggagaccctcccctacagaaggaccttatggatgcaattacaaaagacaataaacta
tacttgcaggagcaagagcttagtgctcgaacacaggcacttcaagctgcttcagcctcg
tgctccttccgccccaatggatttgatgacaacgatcccccaggaagttgtggaccagca
ggcggaggaggagggggtggattcagtactgttggtagattagtcttttga
DBGET
integrated database retrieval system
