Coturnix japonica (Japanese quail): 107313401
Help
Entry
107313401 CDS
T04297
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03020
RNA polymerase
cjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107313401 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
107313401 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107313401 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107313401 (POLR2B)
Enzymes [BR:
cjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107313401 (POLR2B)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107313401 (POLR2B)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107313401 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
107313401
NCBI-ProteinID:
XP_015717053
LinkDB
All DBs
Position
4:complement(43862444..43879832)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggatgaagatatgcaatatgatgaggacgacgacgagatcacccccgac
ctgtggcaggaggcgtgctggatcgtcatcagctcctattttgatgaaaaaggtttagtc
aggcaacagctggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccgattgatttacaggcagaagcccagcatgccacaggagaagtggaagaa
ccgccccggtatctcctgaagtttgaacaaatctatctctccaaacctacgcattgggaa
agagatggagcaccgtcacctatgatgcccaatgaggccaggctgagaaacctgacgtat
tcagcccccttgtacgtggatataactaaaacagttattaaagaaggggaagatcagcta
cagacacaacatcagaaaacttttataggaaaaattcctataatgttacgatcaacgtac
tgtttgttaaatggcttaactgaccgtgatctttgtgaactgaacgaatgccctctggat
ccgggtggctattttatcattaatggatcagaaaaggttctgatcgctcaagaaaaaatg
gccacaaacacagtatatgtgtttgcaaagaaagattccaaatatgcctacacgggagaa
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgctg
gccagaggtgggcagggtgcgaagaagagtgctattggtcagcgcattgtagcaacgttg
ccatatatcaaacaagaagtgccaatcataattgtcttccgtgcactagggtttgtgtct
gacagggacattttagagcacatcatttatgattttgaagatccagaaatgatggaaatg
gttaagccttctctggatgaagcctttgtcattcaggagcaaaatgttgctctgaacttc
attgggtcaagaggtgcaaagccaggtgtcaccaaggaaaagagaatcaagtatgctaaa
gaagtcctgcagaaagaaatgcttccacacgttggtgtcagtgacttctgtgaaaccaag
aaggcctatttcctagggtatatggttcatagattgttgctggctgcactgggccgaagg
gagcttgatgacagagatcattatggcaacaaaaggctggatcttgctgggccactgctg
gcttttctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatacgcacaa
aagtttattgacagagggaaggatttcaacttggagctggcaattaaaacgagaattatt
tctgatggtttgaaatattcattggccactggaaactggggtgatcagaagaaagctcat
caggccagagcaggtgtatctcaggtgttaaaccgcctgacttttgcatcaacactttcc
catctgagacgcctgaattctccaattggtagagatggaaagctagcaaagcccaggcag
ctgcacaatacactgtggggaatggtttgcccagctgagactccagagggacatgcagta
ggacttgtgaagaacttagccctgatggcctacatttctgtggggtctcagccatccccg
atcttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
attgcagatgctaccaagatttttgtcaacggctgctgggtaggaatacacaaagaccca
gagcagcttatgaataccctaaggaagctccgtcgtcagatggatatcattgtgtcagag
gtctcaatgattagggatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgccgacctcttctaattgtggaaaagcagaagttgttgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaactacagttggcaggaccttgtggccagtggt
gtagtggagtacatcgatacactggaagaagagactgtgatgctggccatgactccagat
gacttgcaggagaagggtgttgcgtactgttcaacatatacccactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattattcctttccctgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggcaatgggagtctacattacaaacttc
catgttcgtatggacacgctggcccatgttctgtattatcctcagaagccccttgtaaca
acgcgctccatggagtacttgcgatttagagagttaccagcaggtatcaattcaatcgta
gccattgcgtcatatacaggctataaccaggaagattctgtcatcatgaaccgttctgct
gtcgacagaggctttttcagatccgtgttctatcgctcctacaaagagcaagagtccaaa
aaaggatatgaccaagaggaagtttttgagaagcctacccgtgagacttgccaaggtatg
agacatgccatctatgacaaacttgatgatgatggtttgattgcacctggggtacgtgtg
tctggggacgatgtcatcattggcaaaacagtaactctgccagaaaatgaagatgaactg
gaaagcactaacaggcgcttcacaaagagagactgtagcacttttctgcgtactagcgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
atcagggtacggtctgtaagaatccctcaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacaccagatatcatcatcaacccccacgccatcccttcccgtatgaccattggtcac
ttgattgaatgtcttcaggggaaggtgtcggcaaacaagggagaaattggtgatgctaca
ccatttaatgatgctgtcaacgtgcagaagatttccaatcttctatcagattatggctat
catttaagagggaacgaggtcctctacaacggcttcaccgggcgaaaaatcacatcacag
atcttcattggtcctacatattatcagcggctgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggcccatccagatacttaacagacaacccatggaaggtagatctcgc
gatggtggccttcgctttggagaaatggaacgagactgtcagattgcccacggagcggcc
cagttcttgagagagaggctgtttgaggcatcagacccgtaccaagtccacgtatgtaac
ctctgcggaatcatggccattgcaaacacaaggactcacacatacgaatgcaggggatgc
cgaaataaaacacagatatctttggttcgaatgccctacgcctgcaaactcctcttccaa
gaactgatgtctatgagcattgcacctcggatgatgagtgtttag
DBGET
integrated database retrieval system
