Coturnix japonica (Japanese quail): 107313464
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Entry
107313464 CDS
T04297
Symbol
PKD2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjo03037
]
107313464 (PKD2)
04040 Ion channels [BR:
cjo04040
]
107313464 (PKD2)
Cilium and associated proteins [BR:
cjo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107313464 (PKD2)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107313464 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
107313464
NCBI-ProteinID:
XP_015717241
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All DBs
Position
4:complement(40613280..40629378)
Genome browser
AA seq
880 aa
AA seq
DB search
MAARGREQLELGRLGESARAGCCPPSPPLSAWSRDNPGFEPEEEEGAVAAGPAMEMDAEW
GGPAAAPSSVGGGRRQRRIPAEVRSRPPGPPEGSAPLRSAWAKRLARRLRGLWGTRLMEE
NNTSRERYLRSVLRELVTYVIFLVVLCVLTYGTVSSSMYYYTRVMSQLFLETPVSKMEKT
DFKTLSTMDDFWKFTEGPLLDGLYWDMWYNNKTIAENKSFIYYENLLLGVPRIRQLKVRN
GSCSIPEDLKDEIKDCYDVYSVANEDTAPFGLRNGTAWTYTNEKDLNGSSHWGLLATYSG
AGYYQDLSRTREVTAVQIASLKKNLWLDRGTRAAFIDFSVYNANINLFCIVRLLVEFPAT
GGLLTSWQFQPVKLIHYISTLDFFLAACEVVFCLFVLYYMVEEILEIHIHRLRYFRSLWN
CLDILIIVLSVAAIGISIYRTSTVDMLLKKLLEDQNSFPNFEPLAYWQMQFNNIAAVTVF
FVWIKLFKFVNFNRTMSQLSTTMSRCVKDVVGFAIMFFIIFLAYAQLAYLVFGTQIDDFS
TFQDCIFTQFRIILGDFNFTEVEEANRILGPIYFTTFVFFMFFILLNMFLAIINDTYSEV
KSDMAQQKAEMELSDLIRKGYNKAMVKLKLKKTTVDDISESLRQGGGKLNFDELRQDLKG
KGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDRSSLPRPLSSRSFSR
SLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRRVDRMEHSIGSIVSKIDAVIVKL
EAMERAKLKRRDVLGRLLDGVTEDERLGRDNEIHREQMERLVREELERWESDDTASQMSH
RLGTPLGLNGQPRSRSSRPSSSQSDGIDGGGGNGGNNLHV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgcgggcgggagcagctggagctggggcggctcggggagtcggcgcgggcc
ggttgctgcccgccgtcccctccgctgtccgcctggagccgcgacaacccgggcttcgaa
cccgaggaggaggagggggcggtggcggcggggccggcgatggagatggacgcggagtgg
ggcggccccgcggccgctccgtcctcggtgggcggcggacggcggcagcggcggatcccg
gcggaggtgcggagccgccccccggggccgcccgagggttccgcgccgctccgcagcgcc
tgggccaagcggttggcacggcggctgcgaggtctgtggggtacaaggctgatggaagaa
aacaacaccagcagagagagatacctgagaagtgttttgcgggagctggttacgtatgtg
atcttccttgtggtgctgtgcgtcttgacatacgggacagtgagttccagcatgtattat
tacacgagggttatgtcgcagctcttcctggaaacgcctgtatccaaaatggagaaaaca
gactttaaaacattgtccacaatggatgacttctggaagttcacagaaggccctctgctg
gatggtctctactgggatatgtggtacaacaataaaaccatagcagaaaacaaaagcttc
atttattatgagaacctgctcctaggggtgccccggattcggcagctgaaagtgaggaat
ggttcatgctcgattcctgaggatttaaaagatgaaatcaaagactgctatgatgtctat
tctgtggccaatgaagatactgcaccttttgggcttcgaaatggaacagcctggacatac
accaatgagaaggacctgaatgggagcagccactggggcttgctggccacatacagtggg
gctggttattaccaggacctctcaaggaccagggaagtgacagctgtgcagattgccagc
cttaagaagaacctgtggttggacagagggacaagagcagctttcattgatttctcagtc
tacaatgcaaacatcaaccttttctgcattgtaaggctgctagtggaatttccagctaca
ggaggccttcttacttcctggcagtttcagccagtgaagctgattcactacatctccact
ttggatttcttcctggcagcctgtgaagtggtgttttgtctttttgttctgtactacatg
gtggaagagatcttagaaattcacattcacaggctgcgctacttcagaagtctctggaac
tgtctggatatccttatcattgtgctttctgtggcagcgataggaataagcatctacagg
acatcaactgttgatatgctcctgaagaagctactagaagatcagaactcattccccaat
tttgaacccttggcatattggcaaatgcaattcaacaacattgctgcagtcactgtattt
tttgtctggattaagcttttcaagttcgttaacttcaacagaacgatgagtcagttgtcc
accaccatgtctcgctgtgtcaaagatgttgttggctttgcaattatgttttttatcatt
ttcttggcatatgctcagttggcctatcttgtcttcggcacccagattgatgacttcagc
actttccaggactgcatatttactcagttccgcatcattttgggagacttcaacttcaca
gaggttgaagaagctaatcgcattttgggacccatttatttcactacatttgtattcttt
atgttcttcatccttttgaacatgtttttggccattatcaatgatacatactctgaagtc
aaatcggatatggcacaacagaaggcagaaatggaactgtctgaccttatcagaaagggc
tataacaaagccatggtcaaacttaaattaaagaaaaccactgttgatgacatttcagaa
agcttgagacagggtgggggaaaactaaattttgatgaactccggcaagatctaaaaggg
aagggccacactgatgcagagattgaggcaatatttaccaaatacgatcaggatggggac
caggaactgacagagcatgaacaccagcagatgagagatgacctggagaaagagagggag
gatctggacctggacaggagctctctgccacgtcctctgagcagccgcagcttttctcgg
agcttggatgactctgaggaagatgaagatgaagacagtgggcacagctcaaggaggagg
ggcagcagctctagtggagtgtcctatgaagagttccaagtactcatgaggagagtggat
cgcatggaacactccattggcagcattgtctccaagattgatgcagtgattgtgaagctg
gaagcaatggagagagccaaactgaaaaggagagatgtcttgggacggctgttggatgga
gtgacagaggatgaaaggttgggccgtgataatgagatccacagggagcagatggagcgg
ctggtacgggaggaattggagaggtgggagtcagatgacacagcatctcagatgagccat
cgtctgggaacaccactgggactgaacgggcagcctcggtcgaggagctcccggccatct
tcctcgcagtcagacggcattgatgggggaggaggaaatggggggaataacctccatgtg
tag
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