Coturnix japonica (Japanese quail): 107313535 Help Entry 107313535         CDS       T04297                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cjo00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     107313535 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:cjo04990]     107313535 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:cjo04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    107313535 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  107313535 NCBI-ProteinID:  XP_015717334 UniProt:  A0A8C2STJ6 LinkDB All DBs Position 4:complement(49084905..49168581) Genome browser AA seq 1268 aa AA seqDB search MLPNCTRKMGTGDYICIAMSGGAPWGFRLQGGKEQKQPLQIAKVRNKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSSGINETLNAERENGKHDNIKNEDY RESTTLQINTAKEIPHGDLCITEIYSETHQGAGESNIHFSEMKQETTKIHRITPKVIGTS KALVTDEDRGKTEERRPGNMVELQLSLPNDGHKSTNAAAVTLLGAEKCTPSGRGPSVQED GTNPVIAIPLSVKEGNVQWSSKVVQFSSSKEVKRIQSAAPTIPRIEVILDCSDREKEAPK SLAERGCVESQVEGGQSEAPPSLPSFAISSEGTEQGEDNQHSERDHRPLKHRARHARLRR SESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERD EDEGEEGEVEEGDKENTFEVSLLATSESEIDEDFFSDLDNDKKIVTFDWDSGLLEVEKKT KSGDEMQTLPETTGKGALMFARRRQRMDQITAEQEEMKARTVHAEEQREVAVSENFQQVS SSAYKTKEEEMLRQQPCISKSYADVSQNDGKIVQQNGFGLAADTNLAFQSSEHQKASSLN RTAKPFPFGVQNRAAAPFSPTRNVTSPLSDLPAPPPYCSISPPPEALYRPLSAPAASKAA PILWSHTEPTERIASRDERIAVPAKRTGILQEAKRRSTSKPMFSFKEAPKVSPNPALLSL VHNAEGKKGSGAGFESGPEEDYLSLGAEACNFMQGQASKQKAPPPIAPKPSLKVSPAAGT PVSPVWSPAVASNKAPSFPAPASPQAAYPAPLKSPQYPHSPSANPPNTLNLSGPFKGPQA TLASPNNPPKTPTTPSAGETKPFEMPPEMRGKGAQLFARRHSRMEKYVVDSETVQANMAR ASSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPPGATKPFPKSTAATKNTKRKPKKGL NTLDIMKHQPYQLDASLFTFQPPSGKESFSIKQIPKLPTSKQATSLRLPGPGSPTNARAS SVYSVPAYSSQPSFQSNASNPVNESYAPTAYSAFSKPESTTTLFTAPRPKFSAKKAGVIA QERSSGRSLSLPGKPSFISRATSPISPLIFQPAPDYFSKPDTAADKPSKRLTPWEAAAKS PLGLVDEAFGPQNMQESIAANVVSAAHRKTLPEPPDEWKQKVSYEPPLPSPSLALLGGKQ SGVTSARKSSLSLSNATTQAGSQQQYAYCSQRSQTDPDIMSMDSRSDYGLSTADSNFNPQ PRGWRRPT NT seq 3807 nt NT seq  +upstreamnt  +downstreamnt atgctgcctaattgcaccaggaaaatgggcacgggggattatatctgcattgctatgagt ggaggggcgccgtggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa atcgccaaggtgcgcaacaaaagcaaagcagctaaggctggcctgtgtgagggggatgag gtggtgtctatcaatggcaaaccctgtggagatttaacctacgctgaagttatcgttctg atggaaagcttgactgatgtcctacagatgcttatcaagagatcctccagtggaataaat gaaactttgaatgctgaaagagaaaatggaaagcatgataacataaaaaatgaggactat agggagagcactacactgcagattaatacagccaaagagataccccatggagacttatgc atcacagagatatacagtgagactcaccagggagcaggagaaagcaacatacacttttct gaaatgaaacaagagactacaaaaattcacagaattactcctaaagtgataggcacctcc aaagcacttgtgactgatgaagacagagggaagacagaagaaagaaggccaggcaatatg gttgagctgcagttatccctcccaaatgatggtcacaagagcaccaatgctgctgctgtg actctcttaggggcagaaaaatgcaccccttcaggaagaggacccagtgtacaagaagat gggaccaaccctgtaatcgcaatccccctgagtgtgaaagagggcaacgtccagtggtca agcaaagtagtccagttttctagtagcaaagaggtcaagaggatccaaagtgcagctcca actatccccaggattgaggtgatcctagactgttcagacagggaaaaagaagcacccaag tctctagctgaaagggggtgtgttgaatctcaagtggaaggagggcagtcagaagcacct ccttctctcccctcctttgcaatctcatcagaaggcacagagcagggagaagacaaccag cactcggaaagggatcacagacctctcaagcacagggcaaggcacgcaagactccggcga agtgagagcctgtcagagaagcaggtgaaagaagccaaatctaaatgtaaaagtattgca ttgctgctgacggcagctcccaaccccaattccaagggggtgttgatgttcaagaagcgt cgtcaaagggcgaggaaatatactttagtcagctacgggacgggggagctcgaacgtgac gaagacgagggtgaagaaggtgaagttgaagagggggacaaagaaaatacttttgaagtg agtttgcttgcaacaagtgagtcagaaatagatgaagatttcttctctgaccttgacaac gacaagaagattgtgacatttgattgggacagtggtctacttgaggttgaaaagaagaca aaaagtggagacgagatgcagacgcttccagagacgacaggtaaaggggccctcatgttt gccaggagacggcagaggatggatcagattacagctgagcaagaggagatgaaggcacgc acagtgcatgcagaggaacaaagggaagtcgctgtgtcagagaacttccagcaagtaagc tcttcagcctataaaacaaaagaggaagaaatgttaagacagcaaccctgcataagcaaa agctatgcagatgtgagccagaatgatggtaaaattgtgcaacaaaatggttttggttta gcagcagacacaaacctcgcttttcagtcttctgaacatcaaaaagcatcatctttgaac agaacagctaaacccttcccttttggggttcaaaaccgagcagccgcaccattttcgccc acaagaaatgtcactagtcctctttcagatttaccagcgcctcctccctactgctctatc agcccaccaccagaggctttatatagacctttatcagctcctgcagcaagcaaagctgca ccaattctgtggtcacacacagagccaaccgaacgtatagcatccagagatgagaggatt gcagtgccagccaaaagaactgggatactgcaagaggcaaagagaaggagcacatcaaag cctatgttctctttcaaagaagcacccaaagtaagtccgaatcctgccctgttgtccctt gtacacaatgcagaaggtaaaaagggttctggagctggttttgagtcaggacctgaagaa gactacctcagtttgggagcagaagcttgcaatttcatgcagggtcaagcatctaagcaa aaggcccctcctcctattgctccaaagccttcactcaaggtctctcctgctgctggcact ccagtctcaccagtttggtcaccagctgtggcttctaacaaagctccttctttcccagct ccagcctcaccgcaggcagcatatcctgcaccactcaaatccccacagtatcctcattct ccctctgccaatccccctaatactctcaacctatctggtcctttcaaagggcctcaggca accctagcgagtccaaacaacccacccaagacaccaaccacaccaagtgctggagaaaca aaaccctttgagatgccaccagagatgaggggaaaaggagcccaattatttgccagaagg cattctcgaatggagaagtatgtggttgattcagagactgtgcaagcaaacatggcacga gcctcatctccaactccatctttaccagcttcttggaaatattcatctaatgtccgagca cctccgcctgttgcttataatcccatacacagtccatcttatcctcctggtgctaccaag cctttccctaagtccactgctgctactaaaaataccaaaagaaaacctaagaaaggtctc aacactttggatattatgaaacaccaaccttaccaacttgatgcatcattatttactttt caacctcctagtggtaaggaaagcttttctattaagcagataccaaagttgcccacttca aagcaagctacatccttacgactccctggtcctggatctcctacaaacgcccgggcatct tcagtgtactctgtcccagcctacagttcacaaccatcgttccaatcaaatgcctccaac ccagtaaatgaatcatatgcaccaacagcctattctgcattttctaagccagaatccact acaactttgtttactgctccgaggccaaaattttcagcaaagaaagctggcgtcattgca caggaaagaagcagcggacgttcattatcacttcctgggaaaccttcattcatttctcga gccacatctcccatttctccacttatatttcagcctgcccctgactacttcagcaagcca gacacagcagctgacaagcctagcaagagactgactccctgggaagcagcagcaaaatct cctcttggcctagtggatgaagcttttgggccacaaaatatgcaggaatccattgctgct aatgtagtatcagctgcacacaggaaaacacttcctgagccgccagatgaatggaaacaa aaagtttcttatgagcctccactcccaagtcctagcctagccttattaggagggaagcaa tcgggtgttacatcagcccgaaaaagctccctgtctctgtcaaatgccaccacacaggct ggctcccagcagcagtatgcttactgcagtcaacggtcccaaacagatcctgatataatg tccatggattccaggtctgactatggcttgtcaacagctgattcaaacttcaatccacag ccaagggggtggaggcgtccaacatga

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