Coturnix japonica (Japanese quail): 107313724
Help
Entry
107313724 CDS
T04297
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107313724 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107313724 (CNGA1)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107313724 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
Connexin
NPR3
Tim54
Zip
SlyX
MDM10
ADI
Menin
BSMAP
SLC52_ribofla_tr
Sec62
DUF2828
Serinc
Motif
Other DBs
NCBI-GeneID:
107313724
NCBI-ProteinID:
XP_015717726
LinkDB
All DBs
Position
4:60060572..60068879
Genome browser
AA seq
646 aa
AA seq
DB search
MKVGVIETHHSHAIIPSVVVQDTSEDPGLKEKGENRCARQRFLPGVFAQYNINNNSNKDE
EKKKKKEKKSKSENKKDGEKQKNKEKKEKHKNKDKKKKEKDEEKKKEIFIIDPAGNMYYN
WLFCITMPVMYNWTMIIARACFDELQNDYLAVWFIVDYVSDVIYIADMFVRTRTGYLEQG
LLVKEEQKLKEKYKSSLQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFEFFQR
TETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSHPEFARLTR
KYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAAR
AEFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAI
NVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVV
ADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTE
YPDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDLEEKVAYMEGSMDRLQTKFARLLAE
YDAAQQKLKKRLTQIEKILKPVIEQEFLDFEEADPSPDKPGAAKTE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtaattgagacccatcattcccatgcaattattcccagcgtggtggtg
caagacaccagtgaggatcctggactgaaagagaaaggggaaaacaggtgtgccaggcaa
cggtttctacccggagtgtttgcacaatacaatattaacaacaacagtaataaagacgaa
gagaagaaaaagaaaaaagaaaagaagagcaagtcagaaaataaaaaggatggagaaaaa
caaaagaacaaggaaaaaaaggaaaaacacaaaaataaagataagaagaagaaagaaaag
gatgaagagaagaagaaagaaattttcatcattgatccagcaggaaatatgtattacaac
tggttgttctgcatcacgatgcctgtcatgtacaactggactatgattattgctagagcc
tgttttgatgagcttcagaatgactacttagctgtatggtttattgttgattatgtctct
gacgtcatctatatcgctgacatgtttgtacggacaagaacaggttacctggaacaaggt
cttctagtgaaagaagaacaaaagcttaaagagaaatataagagctccctacaattcaaa
ttggattttctgtcaatcataccaactgacctcttatactttaagctaggactgaattac
ccagaactgagaataaaccgactgctcagagtagctcggatgtttgaatttttccagaga
acagaaacaaggacaaactacccaaatatcttcaggatctctaacctcgtcatgtacatc
gtgattattattcactggaatgcctgtgtgtattactcgatctcaaaagccattggattt
ggggctgacacgtgggtctaccccaatacttcccatcctgaatttgcccgtctgaccaga
aagtatgtctatagtctctactggtccactctgaccctgactactattggtgaaacaccc
cctcctgtacgggattcggagtatttctttgtggttgttgacttcttggttggagtattg
atttttgccaccatcgttggtaatgtcggctctatgatctccaacatgaatgctgccagg
gcagagtttcaagcaaagattgatgctatcaagcagtatatgcactttcgaaatgtaagt
aaagacatggaaaaaagagttataaagtggtttgactatctctggacaaacaaaaaggct
gtggatgaaagggaagtcttgaagtatctgccggacaaactaagagcagagattgcaatc
aacgttcatctggaaacactaaaaaaagttcggatttttgcagactgtgaagctggcctg
ttggttgaacttgttttgaaactccagccgcaagtctacagccctggggactatatttgc
aggaaaggagatattggacgagaaatgtacattatcaaagaaggcaaacttgcagtagtc
gctgatgatggagtgacacaatttgtggttctaagtgatggcagctattttggagagata
agcattcttaatatcaaaggtagcaaagctggcaatcgaagaacagccaatattagaagt
attggatactcagacttgttctgtctgtctaaagatgatctcatggaggctttaacagag
tatcccgatgcaaaggcaatgctggaagaaaaaggtaaacaaatcctaatgaaagatgga
ttgctggacattgaagttgcaaatttaggaagcgatcctaaagacctggaagagaaggtg
gcttatatggaaggatcaatggacaggttacaaacaaagtttgccaggttgttagctgag
tatgatgctgcacaacagaaactgaaaaaaagacttacacaaattgagaaaatattgaag
ccagttatagagcaagaatttttagactttgaagaagcagatccatccccagataaacct
ggagcggcaaaaacagaataa
DBGET
integrated database retrieval system
