Coturnix japonica (Japanese quail): 107313734
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Entry
107313734 CDS
T04297
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107313734 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107313734 (FIP1L1)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107313734 (FIP1L1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107313734
NCBI-ProteinID:
XP_015717759
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Position
4:complement(59317759..59351024)
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AA seq
529 aa
AA seq
DB search
MSTGEVERLSADLGGAAGDEEEEWLYGDENEAERPEEEKTSAPPPPGNEEEAAENGVVKT
KATEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKTGGRVYGSSAGVKV
KGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIR
MGLEILPVTSATNKITVQQGRTGNLEKELAVQSTKADFTSPPALFKSGIPTNRRLSGAID
VIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFTKPPPFFPPGAPPTHLPPPPFLP
PPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSVRAFSYG
SVTFPHLAGSAPSWSSLMDSSKQWDYYARREKDRERDRDRSRDRDRDRDRDRDRERTRDR
ERDRDHSPSSSTFNSDEERYRYRDYAERGYDRHRTSREKDDRHRERRHREKEDTRHKSSR
SNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASSEPAPEQENTEAAPVE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctgtcggcggacctcggcggggccgccggggacgag
gaagaagagtggctctatggcgatgaaaatgaagcagagaggccagaagaagaaaaaact
agtgctccacccccacctggaaacgaagaggaggctgcagaaaatggcgttgtgaaaacg
aaggcgactgaggctgaggatgacagcgatagtgatagcgatgatgatgaagatgatgtt
caagtcaccataggagatattaaaacaggagctccacagtttagttatggagcagcacct
gtgaacctcaatattaagacaggaggacgagtttatggatcttctgcaggtgtaaaagtt
aaaggggtggatttggatgcgccaggaagtattaatggtgtgccacttctggaagtagat
ctagattcttttgaagataaaccttggagaaaaccaggggctgatctatctgattatttc
aactatgggttcaatgaagatacgtggaaagcatactgtgaaaaacagaagagaatacga
atgggtcttgaaattttaccagttacctcagccacaaataaaataacggtacaacagggc
agaactggaaatctggagaaagagttggcagtgcagtcgaccaaagctgatttcacatct
cctcctgccttattcaaatcaggaattccaacaaacaggcgattatctggagcaatagat
gtgattggacagaccatcactatcagcagggtagaaggacgacgacgtgctaatgaaaac
agcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttaccaagcca
cctccatttttccctccaggagctccacctactcaccttccaccacctcctttcctccca
ccccctccaactgtcagtactgctccgcctctgattcccccaccaggtataccaatcaca
gtaccaccaccaggctttccaccaccacctggcggtcctccaccttccctcatacccacc
atagaaagtggacattcctctggctatgacagtcgttctgttcgtgcattttcatacggc
agtgtcacctttccgcaccttgcaggttctgctccttcatggtctagtcttatggacagc
agcaaacagtgggattactatgcacggcgagagaaggatagggaacgggacagagatcga
tctcgggatcgagatcgggaccgggaccgagacagagatcgagaacgtaccagagacagg
gaaagggaccgagatcacagcccatcttcaagcacgttcaacagtgatgaagaacggtac
agatacagagactatgcagaaagaggctacgaccgccataggacaagcagagagaaagat
gaccgacacagagagaggagacacagagagaaagaagatacaagacacaaatcatctcga
agtaacagcagacgccgccacgacagtgaagaaggagacagccacagaaggcacaaacac
aaaaaatccaaacgaagcaaagaaggaaaagaagccagcagtgaacctgctcctgagcaa
gaaaacactgaagctgcccccgtggaatag
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