Coturnix japonica (Japanese quail): 107313825
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Entry
107313825 CDS
T04297
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107313825 (TBC1D1)
Membrane trafficking [BR:
cjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107313825 (TBC1D1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107313825 (TBC1D1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
107313825 (TBC1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
RnlB_antitoxin
Motif
Other DBs
NCBI-GeneID:
107313825
NCBI-ProteinID:
XP_015717976
UniProt:
A0A8C2U8Y9
LinkDB
All DBs
Position
4:complement(62932589..63022449)
Genome browser
AA seq
1278 aa
AA seq
DB search
MEPITFKAKKYQAPSDFSASFTLQLVGSLPVHSLTTMSMLPWIVAEIRALSSTQSSKEEL
GISQIRLYVSPSSLRCEPDTGKNQQWDPLICSGLFEYKPQHVHKLIHNSHDPSYFACLIK
DGAANQQSTCYVFKADDQTKVPEIISSIRQAGKIARQEEFQNNLSDIEDPFAKKFEVLFC
GRVTVAHKNAPPALIDECIEKFNHASCTKKSDSNSSSQQHETANNSGGFSFSNKFRSVFQ
PLMGEEEEKRPIRKSFSQPGLRSLAFKKDFQEGSHRSNSFVRSFEEDAISLNLKSQLIYG
HSVVQPTDIAENRTMLFTIGQSEVYLISPDTKKVAIEKSFKEISFCSQGIRHVDHFGFIC
RESSENGGFHFVCYVFQCADEALVDEIMMTLKQAFTVAAVQQTSKAQPQLCETCPLQSLH
KLCEKIEGLHPSKTKLELQKHLTTLNSQEQASVFEEVKKLRPRDDQKENELIISILRNMY
EEKQKDHVHIGEGKQTSQPSAENAANEVPSSAPRFRLDMLKNKAKRSLTESFESILSRGS
KARGPLDSSSGSVDLETSVSSTANSANKEPPLSEREIDRVSTLPPENAAKTSGSVGDLSG
DPDGFAIDHSVMLPQQSFRRRANTLSHLPSESRESLVPAETSPSVPQRKLMRYHSVSTET
PHKRNSSGQLARSPTLARLNPSASSPNFLKYLRHNSSGEQSGHFAQKSISYRTALRKKLH
SSSSVPNFLKFLAPVDENNTSDFRSTTSDYESKHSQQAAGADSPVRTRRHSWRQQIFLRV
ATPQKACDSPSRYDDYTELGELPPRSPLEPVCEDGPFGPVKEERKRTSRELRELWKKAII
QQILLLRMEKENQKLQASENNLQNRRLKLDYEEITPCLKEVTLIWEKMLSTPGRSKIKFD
AEKIHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPNKQQPKDTPYKELLKQLTSQQHAIL
IDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGVLLLHMSEEDA
FKMLKFLMFDVGLRKQYRPDMTILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPW
FLTMFASQFPLGFVARVFDMLFLQGSEAIFKVALSLLGSHKPLILQHENLETIVDFIKNT
LPNLGLVQMEKTISQVFEMDIAKQLQAYEVEYHVLQDELIDSSLNDNQRLDKLEKANSSL
RKQNFELLEELQVANGKIQNLEATVELLLANEGKLKESILTLEQERTALQKAVEEMRKKI
GDTNEKPLLTRQDHLDAD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggagccgataacattcaaagctaagaaatatcaagcacctagtgatttctcagcaagc
ttcacccttcagctcgtcggttccctgcctgtgcattccctaaccactatgtccatgctg
ccttggattgtggcagagatccgggctctcagtagtacacagtcttccaaagaagaactt
ggtatcagccaaatccggctttatgtttcaccatcgagtttgcgttgtgaaccagacacg
gggaaaaatcagcagtgggatcctttgatttgttctggtctgtttgaatacaagccccag
catgtccacaaactgattcacaacagccatgatccaagttactttgcttgcctgataaaa
gatggagcggcaaatcagcagagtacctgctatgtattcaaagctgatgatcaaacaaaa
gtgcctgagattataagttctattcgacaagctggaaaaattgctcgtcaagaagagttt
cagaataatctttcagatattgaagacccttttgccaaaaagtttgaggttctgttctgt
ggtcgtgtgactgtagcacataaaaatgcacccccagctctcatagatgaatgcatcgag
aaatttaatcatgcgagttgtacaaaaaaatcagattccaactcctcatcccaacaacat
gaaactgccaataactccggaggcttctctttcagcaacaaatttcggtctgtcttccag
cccttgatgggtgaagaggaggagaaaaggccaattaggaaatccttttcccaacccgga
cttcgttccctggcttttaagaaggattttcaagagggaagccataggagtaacagcttt
gtcaggtcttttgaagaagatgccatttcgctaaacctaaaaagtcaacttatctatgga
cacagtgttgtgcagccaacagacattgcagaaaacaggacaatgttgtttacgattggc
cagtctgaagtttacctcatcagtcctgacacaaaaaaagtagcaattgagaaaagcttt
aaagaaatatcgttttgttctcagggaattagacacgtggatcactttggattcatctgc
agagagtcttcagaaaatggaggcttccactttgtttgctacgtgtttcagtgtgcagat
gaagcactggttgatgaaatcatgatgacattgaaacaggcttttactgtagctgctgtg
caacaaacttccaaggcacaaccccagctctgcgaaacgtgtcctctgcaaagcttgcat
aaactctgtgaaaagatagaagggctacacccttctaagactaaactagaactacaaaag
catctaacaacactaaatagccaggagcaggcttctgtttttgaagaggttaagaaattg
agaccaagagatgatcaaaaagagaatgagctgattatctctattttgagaaacatgtat
gaagaaaagcagaaggaccacgttcacattggggaaggaaaacaaacttcacaaccgtct
gctgagaacgctgcaaatgaagtgcccagcagtgctccaagattcagattagatatgttg
aagaacaaggcaaaaagatctctgacagagtcatttgaaagtattttatcacgtggcagt
aaagccagaggtcctctcgacagttctagtggatctgtggatctggagacctctgtgtcc
agcactgcaaacagtgcaaataaagagccaccattgtctgaaagggagatagacagagtt
tctacacttcctccagagaatgctgccaagaccagtggatcagtgggtgatctctctggt
gacccagatggttttgctattgatcattctgtaatgttacctcaacaaagctttcgaagg
cgagcaaacacactgagtcatttaccatcagaaagccgggagtctctggtacctgctgaa
acatcaccatctgttccccagaggaaacttatgaggtatcactcagtgagcacagaaact
cctcacaagagaaattcttctggtcaacttgcacgttctcctactctagctcgtcttaat
ccctcggcctcttcacccaactttcttaaatatctaaggcataattcaagtggagaacaa
agtgggcattttgcacaaaagagcatctcctaccgtactgccttaaggaaaaagcttcat
tcttcctcttctgtgccaaatttcttaaaatttctggctcctgtagatgaaaataacacc
tcagactttaggagcacaacaagtgactacgaatccaaacacagccagcaggctgctggc
gctgacagccctgtaaggacacgacgacattcttggagacagcagatattcctgcgggtg
gccactccccagaaagcatgtgattctcccagtcggtacgatgattacactgagctggga
gaacttccacccagatctcctttggaaccagtgtgtgaagatggcccctttggtccagtg
aaggaagaaagaaaacggacatcccgtgagcttcgtgaactgtggaagaaagccattatt
cagcaaatactgctcctcagaatggagaaagaaaaccagaagttacaagcctcagaaaat
aatttgcagaacagacgtctcaagcttgactatgaagaaatcacaccgtgcttgaaagag
gtaaccttgatttgggaaaaaatgttgagtacacctggaaggtcaaagattaaatttgat
gcggaaaaaatacactctgctgttgggcaaggagtaccacgtcaccaccgtggggagatc
tggaagtttctagcagagcaatatcatcttaaacatcagtttccaaataaacaacaacca
aaggacacaccttataaagaactccttaaacaactaacttcccagcaacatgcaatactt
attgacctaggacgcacatttccaacacatccgtacttctcagcacagctgggagctggg
cagctgtcactctacaatatattgaaagcctattcccttctggaccaggaagtaggatat
tgccagggacttagttttgtagcaggagttctactacttcatatgagtgaagaagatgct
tttaaaatgctgaagtttctcatgtttgatgtggggctaagaaaacagtatcgtcccgac
atgacaattctacagatccagatgtatcaactgtcccgacttcttcatgactaccatcga
gacctctataaccacctcgaggaacatgagattggtcccagcctctatgctgctccctgg
tttctcaccatgtttgcctcacagtttcccctcggatttgttgcaagagtatttgatatg
cttttccttcaaggatcagaggctatatttaaagtggccttaagtctcctgggaagccac
aagcccttgattctgcagcatgagaacctggaaaccattgttgattttattaaaaacact
ctccccaacttgggtttggtacagatggaaaagacaattagtcaggtttttgaaatggat
attgccaagcagctgcaagcttatgaagttgaataccacgtgcttcaggatgagcttata
gattcatctttgaatgacaatcagagactggataagttagaaaaggcaaacagtagcttg
cgcaaacagaactttgaactcctggaagaactgcaggtggctaatggaaagatccaaaac
cttgaagccacagtagagcttctattggctaatgaaggcaaattgaaggagtcaattctc
actcttgagcaggaacgaacagctttgcagaaggcagtggaagagatgcgaaaaaagatt
ggagatacaaatgagaagcctctgcttactagacaagaccacctggatgctgactga
DBGET
integrated database retrieval system
