Coturnix japonica (Japanese quail): 107314263
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Entry
107314263 CDS
T04297
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjo03009
]
107314263 (IGHMBP2)
03012 Translation factors [BR:
cjo03012
]
107314263 (IGHMBP2)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107314263 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
107314263 (IGHMBP2)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Other ribosome biogenesis factors
107314263 (IGHMBP2)
Translation factors [BR:
cjo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107314263 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Helicase_RecD
ResIII
Viral_helicase1
nSTAND3
DEAD
AAA_16
AAA_22
UvrD-helicase
AAA_25
Flavi_DEAD
SLFN-g3_helicase
IstB_IS21
ABC_tran
DnaB_C
AAA
PhoH
Zot
NPHP3_N
Laminin_N
ATPase
AAA_33
DAP3
AAA_31
UvrD_C_2
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
107314263
NCBI-ProteinID:
XP_015718818
UniProt:
A0A8C2TPG3
LinkDB
All DBs
Position
5:1256411..1279853
Genome browser
AA seq
982 aa
AA seq
DB search
MAAEAAERQLELLREEREAEIAERRAWQESVSLKELQRRGVCLLKLQAANQRTGLYGRLL
VTFQPRKHDSDAELPYNSFGPGDIVGLYDSAGQGDLLSTGIVTRVTSKAVTVAFEESRDG
MLSVDHESSYRLLKLTNDITYNRIKKALNALKHYHGGPASHLIDVLFFSLDPSPSSETKP
LKLYNDSLDASQREAVSFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGQKVLCCAPS
NVAVDNLVERLAGYKARILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAF
AKSKKAQDKGERGHFLSEIKALRKELKEREETAMTVALTHASVVLATNTGASSDGPLKLL
PENYFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAATKGLSLSLME
RVIKRYGEKVVKMLTVQYRMHEAIMQWASSEMYDGRLSAHPSVAQHLLKDLPGITCTEET
TIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVDAGVKAQDIAVVAPYNLQ
VDMLREHLCHKYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRA
RRHVAIICDSRTVGSQAFLGRLLEHFRQHGQVHTAFEYLNDLVPENYSHGGEQQQSTKAP
AAPSTKQQPAPRRKPKAAAKAAPQKQEARCSPSTSRPGGESPGTKGDTNKFKAELEAFLQ
SDKTQLDFPSSLSPHDRMLIHHLAEEHGLQHISTGEGRDRYISIRKELGQAVVAPAATPS
EQQPAPQTQDSSGEVPAPTKPEEISEGSGKVDLKRLHLERVQREKARREEMARKAQESSV
STRGSSRKKDKSECKGKAAAKTTADGASEEDIDALISAAIKADNTCGFPHCKASVTTLGQ
ICPHCNRRYCFSHHIPEVHSCGDKAKAHARQWISREGVLYPGSGPKDKSLDPTKRAHLQR
RLDKKLSDLTNQRKSKKKGKEK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggctgagcggcagctggagttgctaagggaggagcgagaagctgag
atcgcagagagaagagcatggcaggaaagcgtctccctaaaggaactgcagcgcagaggc
gtctgcttactaaaacttcaagctgccaaccaaagaactggcctctatgggcgtctgctt
gtgacatttcagcctagaaaacatgattcagatgccgagctgccttataacagttttggg
cctggtgacatcgtgggcctttacgattcagctggccaaggtgatctgctctccactggc
atcgtaacacgtgtcacctccaaagcagtgaccgttgcctttgaggagtctcgagatggc
atgctgagcgtggatcatgagagctcgtaccgcctgctgaagttaaccaatgatatcacc
tacaacaggataaaaaaagctttaaatgcactaaagcattatcacggtggtccagcctct
catctgattgatgtcctcttcttttctttggatccaagcccatccagtgaaacaaagcct
ttaaagctctacaatgactcgctggatgcatcacagagggaggctgtctccttctcacta
gcacaaaaggagcttgccatcatccatggaccacctggcacagggaagaccacaacagtg
gtagagatcatcttgcaagctgtccagcaaggccagaaagtcctatgctgtgccccttcc
aacgttgcagtggataacctggtggaaaggctggctggctataaagcccgtatcctgagg
cttgggcaccctgctcgtctactggagcccatccagcagcattccttggatgcagtcttg
gcccgcagtgacagtgcccagatagtggcagatgtcaggaaggacatcgaccaggctttt
gcaaaatccaaaaaggctcaagacaaaggggagcggggccattttctcagcgagattaag
gcactgagaaaggagctgaaggaacgagaagaaactgccatgactgtagcccttacccac
gccagtgtagtccttgctacaaatacaggtgcttcttctgatggcccgctgaagctgctg
cctgagaactactttgatctggtggtgatagatgagtgtgcccaggccctggaagccagc
tgctggatacctctgctgaaagctccaaagtgtatcctggctggggaccacaagcagctt
ccccccaccatcatcagccacaaagctgctaccaagggcctttcactcagcttgatggag
cgtgtcatcaagaggtacggggagaaggttgtgaagatgctgacagtgcagtaccggatg
catgaagccatcatgcaatgggcttcctcagagatgtacgacggccggctcagtgctcac
ccatcagtagcccagcatctactcaaggacctgccaggcatcacctgcacagaagaaacc
acgattcccttactgctcatagacactgctggctgtggcctgttcgagctggaagtggaa
gatgaacagtctaaggggaatccaggagaagtgcagctggctggtttgcacatccaggct
ttggtagatgctggtgtgaaggcgcaagacatcgctgttgttgccccctacaacctccag
gtggacatgttgagggagcatctttgccacaagtaccctgagctagagattaaatcagtt
gatggtttccaaggcagagagaaagaggcagtgatcctgtcatttgtgagatccaacagg
aaaggtgaggtgggttttctcgccgaggaccgtcggatcaatgttgctgtgacacgtgcc
cggcgccacgtggccatcatctgtgacagccgcacagtgggcagccaggccttccttggg
aggctgctggagcacttcaggcagcacggccaggtgcacacagcatttgagtacctcaat
gacctcgtgcctgaaaactactcccacggaggggagcagcagcagagcaccaaggctcct
gcagcacccagcactaaacagcagccagctccaaggaggaaacccaaagcagcagctaaa
gcagctcctcaaaagcaagaagcacgttgctcccctagcacaagtagacctgggggagag
agcccagggacaaaaggtgacacaaacaagtttaaagctgagctggaagccttcctgcag
agtgacaagacacagctggatttcccctcatctctcagtccacacgaccggatgctgatt
caccacctggccgaggagcacgggctgcagcacatcagcaccggggagggcagagaccgc
tacatcagcattcgcaaggagcttggtcaggctgtggtagccccagccgcaacccccagt
gagcagcagcctgctcctcagacacaggactccagtggggaagttccagcccctactaaa
cctgaagaaataagtgagggctcagggaaagtggacctgaaaaggctgcacctggagaga
gtgcagagggagaaggccaggcgggaggagatggcaagaaaagctcaggagtccagcgtt
agtactcggggcagcagcaggaagaaagacaaaagtgaatgcaaaggaaaagcagcagct
aaaaccacagcagacggtgcttcggaggaagatatagacgctctgatttctgctgccatt
aaagctgacaacacctgtggcttcccccactgcaaagccagtgtcacaaccctgggccag
atctgcccgcactgcaacaggcgatactgcttcagccatcacatcccagaggttcacagc
tgcggggacaaggccaaggcacacgctcggcagtggatcagtagggagggggttctgtac
cctgggagcggccctaaggataaatccctggaccccaccaagagagcccatctccagcgc
cgcctggacaagaagctcagtgacctgacaaaccagcgcaagagcaagaagaaaggcaag
gagaaatga
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