Coturnix japonica (Japanese quail): 107314342
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Entry
107314342 CDS
T04297
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107314342 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107314342 (CSTF3)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107314342 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
107314342
NCBI-ProteinID:
XP_015718961
UniProt:
A0A8C2TUK8
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All DBs
Position
5:4194697..4229917
Genome browser
AA seq
718 aa
AA seq
DB search
MSAEGGTGEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNAMLNKAVKRSNEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagggagggaccggcgagcaggctgccgaatatgtaccagaaaaagtgaag
aaagctgaaaagaaactagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgtgaaaccaaggggaagctgcctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaagggcgtagaagctgtaggatcttat
gcagaaaaccagaggataacagctgtccgtagggtgtaccagcgtggatgtgtgaatcca
atgattaacatagaacagctctggagagattataacaaatacgaagagggaatcaacatt
cacttagcgaagaagatgattgaagacaggagtagagattacatgaatgcaagacgtgta
gcaaaggaatacgagacggtcatgaaggggctggatcgcaatgccccctctgtgcccccc
cagaacaccccgcaggaggctcagcaggtggacatgtggaagaagtacatccagtgggag
aagagcaatcctctacgtacggaggatcaaactctcatcacaaaaagagttatgtttgcc
tatgagcaatgccttttggttctgggacaccacccagatatctggtatgaagctgcacag
tatcttgagcaatctagtaagctgctagctgaaaaaggggacatgaacaatgctaaactt
ttcagcgatgaggctgctaatatttatgagagagccatcagcactttactaaagaagaat
atgcttctctattttgcgtatgcagattatgaagagagtcgaatgaagtatgagaaagtg
cacagcatctataaccggctcttggctattgaagacatcgatcccactctggtttatatc
caatacatgaaatttgcaaggcgagcagaaggcataaaatctggaagaatgatatttaaa
aaggcaagagaagacacccggacccgccaccatgtctacgtcactgcagcattaatggag
tattactgcagtaaggataaatctgtggcctttaagatttttgagctggggctgaaaaaa
tacggagacattccagaatacgtactggcatatatcgactacctgtctcaccttaatgag
gacaacaacacaagagttttgtttgagcgtgttttgacttcagggagcctcccgcctgag
aaatcaggggaaatctgggctcggtttctagcttttgaaagtaacattggtgacctcgcc
agtatcctgaaagttgaaaaacggaggtttacagcattcaaggaagaatatgagggtaaa
gaaacagctctgctcgtagacaggtataagttcatggacttgtacccttgctctgcaagt
gagcttaaggctcttggttataaggacgtctcccgtgccaagttggcagctataattcca
gaccccgtggttgcgccgtccattgtgcctgttctcaaagatgaagttgacagaaaaccc
gaatatcccaaaccagacacccagcagatgattccatttcagccacgacacttagcacct
ccaggtttacatcctgtaccaggaggtgtatttcctgttccaccagcagctgtagtccta
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatatttagaagatgcaaactgccagacactgtcgatgaagctgtacggataatt
actggaggcctacctgaaatagctgtggaaggcaatggacctgtggaaaacaatgctatg
ctcaataaggctgtcaagagatctaacgaggattctgatgacgatgaggagaaaggttca
gtagttccccctgtacacgacatttacagagcacgacaacaaaagagaatccggtga
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