Coturnix japonica (Japanese quail): 107314593
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Entry
107314593 CDS
T04297
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107314593 (CTR9)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107314593 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
107314593
NCBI-ProteinID:
XP_015719464
UniProt:
A0A8C2SSN6
LinkDB
All DBs
Position
5:complement(13019679..13038290)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPMSRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKADEGSDDEENENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSE
EDSDSDRSARKRRRSDSEQSDNESVQSGRSRSGGSDNESRPASRSADSDRDSERGSDNEG
SGRGSGNESEPEGSNNEGSEGGSDDSD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccattgagatcccgctgcgggacaccgatgaggttattgagcttgac
ttcgatcaattacctgagggtgatgaagttataagtatactgaaacaggagcatacacaa
ctgcacatatggattgccttggcgctggaatattacaaacaaggaaaaacagaagacttt
gtaaagctgttggaagctgcacgcatagatgggaacttggactatagagatcatgaaaaa
gatcaaatgacatgtctggatactctggcagcatattatgtacagcaggctcgaaaggag
aagaacaaggataacaagaaggagctcattacacaagctaccttattatatactatggct
gacaaaatcatcatgtatgatcagaatcacttgctgggaagagcctgtttttgtctgctc
gaaggtgataagatggaccaggctgatgctcagttccattttgtgcttaaccagtctcca
aataatattccagcccttcttggtaaagcatgcatttctttcaacaagaaggattataga
ggagcccttgcgtactacaagaaagcactgcgtaccaatccaggctgtccagctgaggtt
cggttaggtatgggtcattgctttgtgaaactgaacaagttggaaaaagctcgcttggca
ttcagcagagctctggagctaaattcaaaatgcgtgggagctttggttggactggctgtc
ctggaactcaataataaagaggctgattccatcaagaatggtgtccagctcctctctagg
gcttacacaattgatcccagtaatccaatggtgctgaatcacttggctaatcacttcttc
ttcaagaaggattacgggaaagtacaacacttggctcttcatgcttttcataatactgaa
gttgaagcaatgcaggcagagagttgttaccagctggctaggtcttttcatgtacaggaa
gattatgatcaagctttccaatattactaccaagccactcagttcgcctcatcttctttt
gtacttcccttttttggattgggtcaaatgtacatttatagaggggacaaggagaatgca
tcgcaatgcttcgaaaaagttttgaaagcatatcctaacaattatgagaccatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaagggacat
ctaaagaaggtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccag
atcctagaacagactgacatacagggtgcgctgtcagcttacggtacagccacacgcatt
ctgcaagagaaagtacaggctgatgtccctccagagattttgaataatgtgggtgctctg
cacttcaggctgggaaacttaggggaagcaaagaaatattttttggcatcactggatcgt
gcaaaagcagaagctgaacatgatgagcattattacaatgctatctctgtgacaacatcc
tataaccttgccagactgtatgaggcgatgtgtgaatttcacgaagcggaaaagctgtat
aaaaacattttaagagagcatcctaattatgttgattgctacttgcgcttgggtgctatg
gctagggataaagggaacttttatgaggcttctgattggtttaaggaagcacttcagata
aatcaggaccatccagatgcttggtctctgattggtaaccttcatttggctaaacaagag
tggggtccaggacagaaaaaatttgaaagaatattgaagcagccttccacacagaatgat
acttactccatgctggctcttggcaatgtctggttgcagactctacatcagcccacgagg
gacagagaaaaggaaaaacgtcatcaggaccgtgcgttagcaatctacaagcaagtactc
agaaatgatccaaagaacttgtatgctgctaatggcataggagctgtcttggcgcataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctatgtagaacagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcagaacactgaagtattg
ttatatctggcccgagcactcttcaaatgtgggaaattacaggaatgtaagcagactttg
ttaaaggccaggcatgttgcaccaagtgatacagtcctcatgtttaatgtggctttagtg
ctacaaagactagctacctctgtcctgaaagatgagaaaagcaatctgaaggaggtactt
aatgctgtgaaagagctggagctagcccacaggtacttcagttacttgagtaaagtgggt
gataagatgagatttgatttggcacttgctgcaacagaagccaggcaatgctctgactta
ctgagtcaagcccagtatcacgtggctcgggcacgtaaacaggatgaagaagagagggag
ctgcgtgcaaagcaagaacaagagaaggagctgcttcgtcaaaaactacttaaagaacag
gaagagaagcgcctaagagaaaaagaagaacagaagaaacttttggaacaaagagctcaa
tatgtggagaagacaaagaatattttgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggtggaggaggcaggcgttccaaaaaaggagcaggggaatttgatgag
tttgtcaatgatgacagcgatgaagatttgcccatgtctagaaagaaaaagaagagaaag
ggcagtggtagtgaacaagatggggaagaagaagaaggggagagaaagaagaagaagagg
aggagaccccagaaagctgatgagggtagtgatgatgaagaaaacgaaaatggtccaaga
cctaaaaaacgacgcccacccaaagcagagaaaaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaagggaagatcaaatcaaaagccataatttcatctagtgatgattca
tctgatgaggataaactgaagattgctgatgatggacatgccaggaatagcaacagcgat
tcagatgatggggaacagcagcacagcaaacgcattgtttctgatagtgattctgataac
agaaacaaatctggtagtgaggcaggcagtccgaggaggtccagtgtccacccatccgaa
gaagattctgacagtgacaggtcagccaggaaaaggagacggtcagattcagagcagtct
gacaatgagtctgtgcagtcaggaagaagtcgttcgggtggttcagataatgaatctcgc
ccagcttctcgcagtgctgactcagacagagattctgagagaggatctgataacgagggt
tctggcagaggatctggtaatgaatctgaaccagaaggatccaataatgaggggtctgaa
gggggttcggatgacagtgattag
DBGET
integrated database retrieval system
