Coturnix japonica (Japanese quail): 107314636
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Entry
107314636 CDS
T04297
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107314636 (SOX6)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107314636 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107314636
NCBI-ProteinID:
XP_032300641
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All DBs
Position
5:complement(15234025..15633690)
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AA seq
817 aa
AA seq
DB search
MPSNSEVLAGVVGESRTEEWMNSHYIRMSSKQATSPFACAADGEETMTQDLASRDKEEGN
SDQHATSHLPLHNVMHNKPHSEELPTLVTTIQQDAEWDGVISAQHRMESESNKLCSLYSF
RNTSTSPHKPDEGSRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMEKLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYA
AQLASMQVSPGAKMPSTPQPPNTAGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPK
TAEPVKSPTSPTQNLFPASKSSPVTVTNKSSIPSPLGGSLGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLPSMNNMGLNNCRNEKDRTRFENLGS
QLTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDS
RGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYY
EEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQP
QIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSLAG
NEMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaactctgaagtgctggctggtgtggtaggagaaagcaggacagaagagtgg
atgaacagccattatataagaatgtcttccaagcaggctacctctccatttgcatgtgca
gctgatggagaggaaacaatgacccaggacttagcatcacgagacaaggaagagggcaac
agtgatcagcacgcgacctctcatctgcctctacacaatgtaatgcacaacaaacctcac
tctgaggagctaccaactctagtcacgaccatccaacaagatgccgagtgggatggagtc
atctcagcccaacacagaatggaatcagagagtaataagttatgttccctatattccttc
cgaaatacctctacctcaccacacaagcctgacgaaggaagtcgtgaccggagtgagcta
atgaccagtgttaattttggaacgccagaacgccgcaaaggaagccttgcagatgtggtg
gacacactgaagcagaagaaactagaagaaatgaccaggactgagcaagaagattcatcc
tgcatggaaaaactactctctaaagactggaaggagaagatggaaaaactaaacacaagt
gatctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctaccatgatcacccagctgatcagcttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgaaaaacaacgacagcaaatggatcttgctcgc
caacagcaagaacagattgcaagacaacagcagcagctcctgcagcagcagcacaaaatc
aaccttctgcagcaacagatccagcaggttcagggtcacatgcctccgctcatgatccca
atttttccacacgaccagcggacactggcagcggctgctgcagcccagcagggattcctc
ttccccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatca
acaatggcagctgctgctgcttctggactcagccctttacagctccagcaactgtatgca
gctcagctggcaagcatgcaagtttctcctggagccaaaatgccatctactccacagcca
ccaaatacagcaggggcactctcacccactgggatgaaaaatgagaaaagagggaccagc
ccggtaactcaagttaaggatgaagcagcccagccactgaatctttcagcccgacccaag
acagctgaaccagtcaaatcaccaacatctccaacacagaacctcttcccagctagcaaa
agcagtccagtgacagtgacaaacaagagcagtatccccagcccccttggtggatctctg
ggaagaggatcctctttagatattctttccagtcttaattcacctgccctgtttggggac
caggacacagtaatgaaagccattcaggaggctcggaaaatgagagagcagatccaaagg
gagcagcagcagcaacagcagccacatggtgttgatggaaaattgccctccatgaataac
atgggtctaaacaactgcaggaatgaaaaggatagaacaagatttgagaatttaggctca
cagttaacagggaaacccaatgaagatggaaagctgggccctggtgtcattgatcttaca
aggccagaagatgcagaaggaagtaaagcaatgaatggctctgcagctaaactacagcag
tattattgttggccaacaggaggtgccactgtggctgaagctcgagtctaccgggattcg
cggggtcgagccagtagtgaaccgcacatcaaacgaccaatgaatgctttcatggtttgg
gcaaaagatgagcgtcgaaaaattctccaagctttccctgacatgcacaactccaacatt
agcaaaatcctaggatctcgctggaagtctatgtcaaatcaagaaaagcaaccttattat
gaagagcaggcacggctaagtaaaatccacctagagaagtatcctaattacaaatacaaa
cctcgaccaaagcgtacctgcattgttgatggaaagaaattgcgtattggtgaatacaaa
caactgatgaggtctcgaagacaggagatgaggcagttttttaccgtaggacaacagcct
caaattccaatcaccacgggaacgggggttgtctatcctggtgctattaccatggcaact
accacaccatcacctcagatgacatcggattgctcaagcacctccgccagccctgagccc
agcatccccgtcattcagagcacttatgggatgaagacggacagcggaagccttgctgga
aatgaaatgataaatggagaggatgaaatcgaaatgtacgaggactatgaggatgatccc
aaatcagactatagtagtgaaaatgaagcccatgaggcagtcagtgccaactga
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