Coturnix japonica (Japanese quail): 107314680
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Entry
107314680 CDS
T04297
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107314680 (HPS5)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
107314680 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
PEP5_VPS11_N
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
107314680
NCBI-ProteinID:
XP_015719639
UniProt:
A0A8C2TGM5
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All DBs
Position
5:16861285..16881151
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AA seq
1142 aa
AA seq
DB search
MESGPAGNAAIPAAVPESYSHVLAELESLDPLLAALRLDSARLKCTCITVSRKWLVLGTS
GGGLNLIQKDGWKQRLFLTHKEGAISRVACCLHDEDYVAVATSQGLVVVWELNQERRGKP
ERIYVSSEHKGRKVTALCWDTAALRVFVGDHVGKVSAIKINTSKQGKAAATFVMFPVQII
TTVDSRVVQLDYLDGRLLISSLTRTYLCDTEREKFWKIGNKERDGEFGACFFPAGKNTGN
QQPLIYCARPGSRMWEVNFDGEVQSTHQFKQLLSSPPLPVVTLRTDPHYATSICSAQSLS
FPKLLYLTEHYVLTWTERGIYIFIPQSVQVLLWSEVKDIQDIAVHKNELFCLHTNGKVAR
FSLLLVDRCVERLMRRGFWTLAARVCCLFQNSVISCRARKNLPLEKLEHLKSQLDASAQQ
DLISHLEELILKLEPLDSASSSRRSSISSHESFSVLDSGIYRVISRRGSQSDDDSCSLHS
QTFSEDERLKEFHAHQEDEQVELDNASHASVTIEADRSDTFLPFSIPLSFRSPSPLVSLQ
AVKESVSSFVRKTTEKIGTLHVSPDSRGKQEAKDDEQQQEVSVNLVASPQEERESELQNH
QLPEEDHLRDLKAATAKAIAKLQDPLCLLEPQCMKRVLQEWLVFLEEKFGSKEHFASSVQ
KSKAVRAEEQREVLEENLQGNPNGGDLVGKEPGCVEEDCTENKDETCENQTIHESSTDSK
GLLDGYFQVSPPCDLEPDVHKDLVELTTLCFELRVFSCGNGDAEDGSDQSLPPAALWTFA
CRFIQSYFFLLDLKRLKQCIITMYASCPNVWETYITGLKELTCHSPMTLAMENEDMLKIL
KQLHDLGPWDDSPLLLVHAQRLYEKFGEMALRPLVKFYPSIVPSDIKQLCRNNPAHFLAY
LDSLLKSVPEDTRSSLLRSLLQPESVRLDWLCLAVSHDAPQRANTVDAEGNPRPRSHLFT
WGYSQLILLLIKLPADFVMKEKMADVCKSHGFWPGYLFLCLELDRRIEAFTNIAHLDDLS
LLNEEDGSIPETTEEWKFLLHLAQNHSSALHNDGPQNGDAVNNSGSPSWPNCITVENVAL
LLSKAIGPNRALPLLQECGLMQELSERFTSVCEILKIAEKRQRALIQSMLDKCDRFLWSQ
QA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggggccggccgggaatgcggcgatacctgcggctgtgccggagtcctacagc
cacgtgctggcggagttggagagcttagacccgctgctggccgcgctgcgcctggactct
gcccggctgaagtgcacatgcatcaccgtgtcgaggaagtggctggtgctcggcacctca
ggaggagggctgaaccttatccagaaggatggctggaagcagaggctcttccttacccat
aaggagggtgccatttcccgagtcgcatgttgtttacacgatgaagactatgttgctgtt
gccactagccagggtctcgtggtggtgtgggagctgaatcaggaacgtcgtgggaagcca
gaacggatttatgtttcctctgagcataagggcagaaaagttacagctctgtgttgggat
acagccgccctgcgtgtttttgtaggagatcacgtggggaaagtatcagccatcaaaatt
aacacatccaaacaggggaaggctgctgctacttttgtgatgtttcctgttcagattata
accactgtagattctcgggttgttcagctggattatttggatggaagattgctcatatct
tcacttacacgcacttatttatgtgatactgagagagagaagttttggaaaattggtaac
aaagagagagatggagaatttggagcatgtttcttccctgctggaaaaaacactgggaat
cagcagccgttgatatactgtgcccggcctggctcgaggatgtgggaggtgaacttcgat
ggggaagtgcagagcacgcatcagttcaagcagctgctctcatctccacctctccctgtt
gttactctcaggacagatcctcattatgctacttccatctgctctgcgcaatctttatct
ttccccaagctactatatttgactgagcattatgttttgacctggacagaaagaggcatt
tatatctttattccacaaagtgttcaagtcttgctgtggagtgaagtaaaagatattcag
gatatagcagttcacaagaatgagttgttttgtctgcatacaaatggaaaagttgcacgc
ttttcccttctgctggtggaccgctgcgtagagcgcctgatgagaagagggttctggact
cttgctgctagggtctgttgtctcttccagaattcggttatttcctgcagggcaagaaaa
aatttacctctagaaaagttggagcacctgaagtctcagttggatgcctcagcccagcag
gatctcatctcacatctggaagaactcatcttaaagttggaacctctagactctgcgagc
agcagtaggaggagcagcatttcatctcatgaaagtttcagtgtgttggactccggcata
taccgtgttattagccgaaggggcagtcagtcagatgacgattcatgttctctccacagt
caaaccttctcagaagatgagaggcttaaagaatttcatgcacaccaggaggatgaacag
gtggaacttgacaacgcatctcatgcatctgtgacgatagaggctgaccggagtgacaca
tttctcccattcagtattcctttatcatttcgttccccatctcctctcgtctctctccaa
gctgtcaaagaaagtgtttccagctttgtacgcaaaactactgaaaagatcggcacactt
cacgtgagtcctgatagcagagggaaacaagaggcaaaggatgatgagcagcagcaggag
gtgtctgttaatctggtagcatctccacaggaagaaagggaatcagagctgcagaaccac
cagcttccagaggaggatcatctaagagatcttaaggctgcaacagcaaaagctatagcc
aaactccaggatcccctgtgtttgttggaaccacagtgtatgaagagggttttacaggag
tggcttgtctttctggaagaaaaatttggcagcaaagagcattttgcttcctctgttcag
aagagtaaagctgtacgtgccgaagaacagagggaagtcctggaggaaaacctgcaagga
aatccaaatggtggagatctagtaggcaaagaaccaggttgtgtggaggaagactgcact
gaaaacaaagatgaaacctgtgaaaaccaaaccatacatgaaagtagtactgattccaag
ggactattggatggctactttcaagtttctcctccatgtgacctagaaccagatgttcac
aaagatctggttgagctgacaacgctgtgttttgaactgcgtgtattttcatgtggaaat
ggtgatgcagaggatggctctgatcaaagcctgcccccagcagctttgtggacctttgct
tgtagatttatacaaagctacttcttccttttggatttaaaaagactaaagcagtgtatt
ataaccatgtatgcaagctgccctaacgtatgggaaacatacattacaggattgaaagag
ctaacgtgtcacagtccaatgactttggcgatggaaaatgaagatatgttgaaaatactg
aaacagctgcatgacttggggccctgggatgatagccctctgttgctggtacatgctcaa
agactttatgaaaaatttggggaaatggctcttcggcccttggtcaagttctacccttcc
attgtgccttctgatatcaagcagctttgcaggaataatccagctcactttttagcatac
ttagatagccttttgaagtcagtgccagaggatacaaggtcatctctccttagatctctt
ctgcaaccagaatcagtacgactggattggttgtgcttggcagtttctcatgatgcacca
caaagagcaaacactgtagatgcagaaggaaatcccaggccacggtcgcatttgtttaca
tggggatacagccaactcattctgcttttgattaaactcccagctgattttgttatgaaa
gagaagatggctgatgtttgtaaatcacatgggttttggcctggatatctttttctctgc
ctggagctggatagaagaatagaagcctttactaatattgctcatttggatgatttgagc
ctgttgaatgaagaagatggttcaattccagagaccacagaagaatggaagtttcttctt
catcttgcacaaaatcatagcagtgctttgcacaacgatggcccacagaatggggatgct
gtcaacaacagtggtagccccagctggccaaattgcatcactgtggaaaacgtagctctt
ttattatccaaggccattggcccaaatcgtgccttgcctctactacaagagtgtggcttg
atgcaagaattgtctgaaagatttactagtgtctgcgagatactgaaaattgctgagaaa
aggcaaagagccctgattcagtccatgttggacaagtgtgaccgattcttgtggtctcag
caagcatag
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integrated database retrieval system
