Coturnix japonica (Japanese quail): 107314743
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Entry
107314743 CDS
T04297
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03420
Nucleotide excision repair
cjo04115
p53 signaling pathway
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107314743 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
107314743 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107314743 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107314743 (DDB2)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107314743 (DDB2)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107314743 (DDB2)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107314743 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_NWD2_C
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
107314743
NCBI-ProteinID:
XP_015719778
LinkDB
All DBs
Position
5:complement(20663887..20703965)
Genome browser
AA seq
507 aa
AA seq
DB search
MAPVNRPKDKKHEKAHERQSEEAKSSGKRKLDYEGQQNVPLTKKLLLRKNKAQEKIAGCN
RGGTVMRNTRALFHQPKWQCSIVHYVYQNMLGGSIRPQFRQCLQLPFVRSLTSYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGGMKFSPY
ESAKLYVASGDGTLSLQDLEGKLVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGD
NLGNVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKAN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRNEIRVYSCSDWTKPQHLIPHPHRHFQHLTP
IKATWHPRYDLIVVGRYPDPNFPGYTAHELRTVDIFDGNTGEMVCQLYDSNASGIISLNK
FNPMGDTLASGMGYNILIWSREEMVMKKQEHLLKAMTEQGIGSRSLSRRGRQRQANPGTS
KLKAKLLFCEVEETGTKAKDSKSQGRK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccggcccaaggacaagaagcatgaaaaggcacatgagcgtcagtca
gaagaggcaaaatcgtctgggaaaaggaaactggactatgaaggtcaacagaatgtgcca
ctaacaaagaaattgttattgaggaaaaacaaagcccaagagaaaattgcaggttgtaat
agaggtgggactgtgatgagaaataccagagcccttttccatcagccaaaatggcagtgc
agcattgttcattatgtctaccagaacatgctgggaggttccatccggccacagttcagg
cagtgtctacagctgccctttgtgcgttctctgacctcataccgcctttttcgaacagcg
agtccctttgacaggagagtgacttgcctggagtggcatccaacacaccccagtactgtt
gccgttggttccaaaggcggagacatcattctttgggactatgaagtacttactaaaact
tgcttcataaaagggaaagggccaggagattctcttggaggcatgaagttcagtccttat
gagtcagcgaagctttatgtggcatcaggggatggcaccctaagcctgcaggaccttgag
ggcaaactggtgcaggtgatctcccgtgccccggactgtggccatgagaaccataatgtt
tgctgctggtactgcagtgttgatgtttctgcaagctgccgtgctgtggtgacaggtgat
aatttgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaagaagaaagtgacccacgtggagtttaactctcgctgtgagtggttattggccaca
gcatctgtggatcagacagttaaaatctgggacctcagaaacattaaaaacaaagcaaat
tttcttcatgtacttcctcatgacaagcctgtcaatgcagcttacttcagcccaacagat
ggtgccaagctgctgagcacagaccagcgcaatgaaatcagggtttactcatgttcagac
tggaccaagcctcagcatctgatcccacacccacatcggcatttccagcatctcacacct
attaaggcaacatggcatcctcgctatgatctcattgtagtgggtcgctatccggaccct
aacttcccaggctacacagcgcatgagctgcgaactgttgatatatttgatggaaacacc
ggggagatggtttgtcagctctatgattcgaatgcatctggtataatctcgctgaataaa
tttaaccctatgggagacacgctagcctctggcatgggttataatattctgatctggagc
cgggaggagatggtaatgaagaaacaagaacatcttttgaaagccatgacggagcagggg
attggaagccgaagtttgtccagacgtggaaggcagaggcaggcaaaccctgggacaagc
aaactcaaagctaagttattgttttgtgaagtagaagagacgggaacaaaagccaaagat
tctaaatcacagggaaggaagtga
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integrated database retrieval system
