Coturnix japonica (Japanese quail): 107314854
Help
Entry
107314854 CDS
T04297
Symbol
UBR1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107314854 (UBR1)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107314854 (UBR1)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
107314854 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
107314854
NCBI-ProteinID:
XP_015720068
LinkDB
All DBs
Position
5:complement(23301017..23350510)
Genome browser
AA seq
1805 aa
AA seq
DB search
MCRRRAAPAQCSRAAAGSGXVEAARCRWELLPGGGVGRLXVTLKMADGGSRGSGAAAPRA
AGGRVPAQPQERAMWCDERFDFQATFLQCLAKHVPNIYSAEMDPLLEKQEEMVQAAIFYP
LECYLFGEDPDTFLEKLQQSGISQLCGKVFKGGETTYSCRDCAVDPTCVLCMDCFQNSIH
RNHRYKMHSSTGGGFCDCGDTEAWKAGPVCTKHEPGASGSPKENSEYQLNEEVMEHSRRV
FPSVIKYIVDMLIWEEEKELPPELTISREKVDSYYCVLFNDEHHSYDHVIYSLQRALGCE
LGEAQLHTTAIDKEGRRAVKAGYYASCQEAKEEIKRHSENVSQRPLHVEVLHADVMAHQK
FALRLGSWLNKLMSYSSDFRKIFCQICLKEEAGSEKPCFISQLMLWDAKLHKGARKVLHE
LIFSSFFMEMDYKKHFAVEFVKYYKTLQKEYISDDHDRVLSVTALSVQIFTVPTLARHLI
EERNVIATITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYAVIYDLRYILISKPTVWTV
RLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEAAIAIQMQLKNILLMFQEW
CACDEELLLRAYKECHKAVMRCSTNGRSREKTVFHLCGHTLESRPYRVSSDPVSIHLPLS
RTLAGLHVQLSKTGAISRLHEFVSSEEFQVELLVEYPLRCLVLVAQVAAEMWRRNGLSLI
SQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNHFLLLLLQRYELADAFKKIKLTKDQDL
IKQCNVLIEEMLQIIIYVVGERYVPGVSNVTKEDVIMREIIHLLCIEPMAHSAITKSLPE
NENNETGLESVIDKVATFKKPGVSGHGVYELKDECLKEFNMFFYHYTKTQHSKAEHTQKK
RRKQENKDEALPPPPPPDFCPAFSNVVRILNCDVMMHILRTILQRAVELETHMWTEAMIQ
MVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSALNAVNVLMLLEKLKRVPQLE
AQKDTVIWILQMFDTVKRMREKSSLTAVVAPSGSETAKGDEAQSTQDKEKAERKRKAEAA
RLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKEDAMMEEESMSSAIDYSRIALGPKR
GPTIAEKEILTCILCQEEQEVKLESAAMVLSACVQKSTALTQNRSRILDLSGDTVDPLFM
HPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIFDLENGEYLCPLCKSLCN
TVIPIVPLQAQKINSEDAEAVAQILSLARWLETVIVRISGYNLKNAKGDQQNAPAFVKKG
LGNSALEFHSILSFGVQSSAKYSSSIKEMLILFATTIYRVGLKVAPNEADDRIPMMTWST
CAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRTTSPQVLIQKHLIRLLGV
LLPHFKVEDTPSLLEVDMFHVLVGVVLSFPSLYWEDAVDLQPSSISSAYNHLYLFHLATL
AHITQIVISSATESPTAPSYDNSEEACSAQAFCREVCQYTSGCFSQDVPGWLVWDCVKKG
IMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLPTNLFLLFQEYWDTVNPL
LQRWCADPVVLSCLKGKSTAVRYPRKRNSLIELPEDYSCLLNQASQFRCPRSSDDEQKHP
VLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMFLKIRECKVVLIEGKTRG
CLYPAPYLDEYGETDPGLKRGNPLHLCRERYRKLHLLWQQHCIIEEIARSQETNQIFFGF
NWQLL
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagacggagggcggcgcctgcgcagtgcagccgtgccgccgctgggtcgggcnnc
gtggaggcggcccggtgtcggtgggagctgcttccgggcggcggcgtaggccggctgnnt
gtgactctcaaaatggcggacggaggcagcagagggtccggagcggcggcaccgagagcg
gcaggaggtcgggtcccggcgcagcctcaggagcgggctatgtggtgtgatgaaagattc
gacttccaagctacgtttttacagtgcttggcaaaacatgtgccaaatatttactcagct
gagatggaccccttgctggagaaacaagaagaaatggtccaggcagcaatattttacccc
ctggaatgttatttatttggggaagacccagatacatttctagagaagctacagcaaagc
ggaatctcccagctctgtgggaaggtgttcaaaggaggggagacaacatactcttgcaga
gactgtgcagttgatccgacttgtgtgctctgtatggactgcttccagaatagcattcat
aggaatcaccggtacaagatgcatagttccactggaggtggattttgtgactgtggggat
acagaggcatggaaggctggaccagtgtgtactaaacatgagcctggagcatcaggttct
ccaaaagaaaattctgaatatcagttaaatgaagaagttatggagcactctaggagggtg
ttcccctctgtgataaaatacatcgtagatatgcttatatgggaagaagagaaggaactg
cctccggagctcacaatcagtagggagaaggtagacagctactactgcgtccttttcaat
gatgaacatcattcttatgatcatgtcatctatagcctgcaaagggcacttggctgtgaa
cttggtgaagcccagttgcatactactgctatagataaagagggtcggagagctgttaag
gcaggatattatgcctcttgtcaggaagcaaaggaggaaatcaagaggcattctgaaaat
gtttcgcagcgaccacttcatgtggaagttctgcatgctgacgtcatggctcaccagaag
tttgccttgcgccttggttcttggctgaacaaactcatgagctattcaagtgactttcgc
aagatcttttgtcaaatatgtcttaaagaagaagctggatctgaaaagccgtgcttcata
agccagttgatgctttgggatgcaaaacttcataaaggagcaaggaaggttcttcatgag
cttatcttcagtagttttttcatggaaatggattacaaaaaacattttgctgtggaattt
gtaaagtattacaagacattgcaaaaagaatacatcagtgatgatcatgacagagttctc
tctgtgacagcactctcagttcagatattcactgttcctactctggctcgccatcttatt
gaagagcgaaatgtaatcgctaccattacagagacactcttggaagtccttccagagtat
ctagacaaaaacgacaagttcaacttccaaggttacagccaagataaactgaatagggta
tatgctgtaatatatgacctcaggtatattttaatcagcaagcctacagtatggacagtc
cgtctgagggagcgctttttagaaggatttgtttctttcctaaggattttaacttgcatg
cagggaatggaagaaataaaaagacagattggtcagcacattgaggtggaccctgactgg
gaagcggccatcgctatacagatgcagctgaagaacatactcttgatgttccaagaatgg
tgtgcctgtgatgaggagctgttgctgagagcctacaaagaatgtcataaagctgtgatg
aggtgcagcacaaatggccgctcacgggagaagacagtgtttcacttatgtggccatact
ttggaaagcagaccttacagagtgtcttcagatcctgtcagcatacatttaccactttct
aggactctggcaggtcttcatgtacaactaagcaagaccggagccatctcaagattgcat
gagtttgtttcttctgaggaatttcaagtggaactgctagttgaatatcctttgcgatgt
cttgttttggttgctcaagttgctgcagagatgtggagaaggaatggtctctccttgatt
agtcaggtgttctattatcaagatgttaagtgcagagaagagatgtatgataaagacatc
atcatgctccagattggagcatctcttatggatccgaaccatttcctattgcttttactc
cagagatacgagcttgcagatgctttcaaaaagatcaagctcaccaaagatcaggatttg
atcaagcagtgtaatgtactaatagaagaaatgttacagatcatcatctatgttgtggga
gaaagatatgtgcctggtgtgagtaatgtgacaaaggaggatgttatcatgagagaaatc
atccatctgctgtgtattgagccaatggctcacagtgcaattaccaaatccttgcctgaa
aatgagaacaatgaaactggcttggaaagtgtaattgataaagtagcaactttcaagaaa
ccaggtgtgtccggacatggagtttatgaactgaaagatgaatgcttgaaagaattcaac
atgttcttttatcattatactaagacccagcatagcaaggctgaacatacacagaagaaa
agaagaaaacaggaaaacaaagatgaagcattgccgccgccgcctcctcctgacttctgt
cctgcgttcagtaatgtggtgaggattctgaactgtgatgttatgatgcacatattgcga
accatccttcagagagcagtagaactggaaacccacatgtggactgaagctatgattcag
atggtgcttcatctcctttctttaggattattggaagagaagcagcagttacagaagtcc
ccagaagaagaagtaacatttgatttttatcacaaagcaacaagaatgggaagctcagcc
ttgaatgctgtaaatgtattgatgcttctggaaaaattaaaaagagttcctcagttggaa
gcacagaaggacacggtcatttggatactgcagatgtttgacacagtgaaaagaatgaga
gaaaaatctagtttgacagcagtagtggctccgtcaggctcagaaactgcaaaaggtgat
gaggcacagagcactcaggataaagagaaagctgagcgaaagagaaaggcagaagcagct
aggttgcatcgtcagaagataatggctcagatgtctgctttgcagaggaatttcattgaa
acccacaaactcctttatgaaaatacattggaggcacaggggaaagaagatgctatgatg
gaggaagaaagcatgtcttcagcaatcgattactccagaattgctttgggtcccaaacga
ggtccaaccattgctgagaaagaaattctgacctgtattctttgtcaggaggagcaagaa
gtgaagctggaaagtgctgctatggtattatctgcttgtgtccagaaatcaactgcctta
actcagaatagaagcagaattcttgacctctcaggggataccgtagatcctctgttcatg
catcctgacttaccatgtggaacccacacaggaagctgtggccatgtgatgcatgcagcc
tgctggcagaagtactttgaagccatgcaactgaacttccgacagcgcctgcatgttgaa
cagatatttgacttagagaatggagagtatctttgtccactttgcaagtctttgtgcaat
actgtgattcctattgttccattgcaggctcaaaaaataaacagtgaggatgcagaggca
gtagctcaaattctctctctggccaggtggctagaaactgtcatagtcaggatatcaggc
tacaatctgaaaaatgcaaaaggagatcaacaaaatgctccagcttttgtcaagaaggga
ttggggaactctgctttggaattccattccatccttagttttggagttcagtcctcagcc
aaatactcgagcagtatcaaggagatgcttattctatttgcaaccaccatttatagagtt
ggactaaaagttgctccaaatgaagctgatgatcggattcctatgatgacctggagcacg
tgtgcttttaccatccagtgtatagaaaacctcttggaaacagaggggaagcctttattt
ggatctctacaaaatagacagcacagtggccttaaagcattagtgcagtttgcggctgct
cagagaacaacatcgccacaggtcctgattcagaaacatctgattcgtcttctaggagtt
cttctaccacactttaaagtggaagacactccatccctcttagaagtagatatgttccac
gttttggtgggagttgtattatcatttccgtctttatactgggaggatgctgtagacttg
caaccttcatcaattagttcggcctataaccacctctacctcttccatctggcaacacta
gcacacataacacaaattgttatctcttcagctacagaatcccctactgctccatcttac
gacaacagtgaggaggcatgctctgcgcaggctttctgcagagaagtttgtcagtacacc
agtggttgctttagtcaggatgttccaggctggctggtgtgggattgcgttaagaaaggc
atcatgccttaccttcgttgtgctgctttattttttcactatttgctgggagtttctcca
cctgaggagctactacaagtttctgaagaagggcagttcaaggcactttgtagttacctc
tctctacccaccaatttattcctgctcttccaggagtattgggacactgtaaatccactc
cttcaaaggtggtgtgctgatccagtggtgctaagttgcttgaagggcaagagcactgca
gtaaggtatcctaggaaaagaaatagcttaatagagcttcctgaagactacagctgcctt
ctgaaccaagcatctcagttcagatgcccacggtcttctgatgatgaacagaaacatcca
gtattatgcttattttgtggggctatgttgtgttcccagaatacttgctgtcaggaactt
gtgaatggtgaggagctgggagcctgtacttctcacgctcttcagtgtggagctggagtc
tgtatgtttctcaaaatcagggaatgcaaagttgtcctcatagaaggtaaaaccaggggc
tgcttgtatcctgctccatacctggatgaatatggagaaacggatccaggtctgaaaaga
ggcaatcccctgcacttatgtcgggagcgttaccggaagctgcatctgctgtggcagcaa
cactgcatcatagaggagattgccaggagtcaagaaaccaaccagatcttctttggattc
aattggcaactgctctga
DBGET
integrated database retrieval system
