Coturnix japonica (Japanese quail): 107315324
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Entry
107315324 CDS
T04297
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107315324 (BRF1)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107315324 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
107315324
NCBI-ProteinID:
XP_015721067
LinkDB
All DBs
Position
5:complement(47898623..48050735)
Genome browser
AA seq
681 aa
AA seq
DB search
MPGGRVCAACGCSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPTLGGGFHANLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEYTPTSQLTIDEFMRIDLEEECDPPSFTAGQK
KLKIQQLEKALSKKLEDFEGEISSYQDEIEIELENSRPKAKGVFANLSKSDSIEDNTLSI
FGEDEAEDEELEAAANHLNKDFCNELLEKDRLKPGEDGECKNGNEAPVRPPALESLLGPL
PTAASLGITESIKECISSKDREPGGNTGDGELDLSGIDDSEIDRYILNETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKAAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSNTPKKEDDSTDDSTNTKKLSRRKSIASRNIASPVNSVGKRLRPL
ISTQLAKKAATEEVTFPNAQAEASNLEKPATVLVESGPVAYNLDEEVEEEEAEEEDDHCM
SALQLMGGNDYGCDMDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtgtgcgccgcgtgcggctgctcggagatcgaggtagacgctgct
cgcggggatgcggtgtgcacgggctgcggctcggtgctggaagacaacatcatcgtgtcc
gaggtgcagttcgtggagaacagcggaggcggttcctccgctgtggggcagttcgtttcg
ttggatggtgcaggcaaaacaccaactttgggaggaggattccatgcgaatctgggaaag
gagtcacgagcacagactctacagaacggaaaacgtcagattcaccacttaggaaaccag
cttcagctcaatcaacattgtctggatactgccttcaatttcttcaagatggctgtaagc
aagcatctgacccgggggaggaagatggcccatgtcattgctgcgtgtctctacctggtg
tgcaggacagaaggaactcctcacatgttactggaccttagcgatcttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgttggcaagagaactctgcataaatgctcca
gccatagatccgtgtttatatattcctcgttttgcacatatgctggaatttggggataag
aaccatgaagtgtccatgacggctctcaggctactgcagagaatgaagcgagactggatg
cacactggccgccggccgtctgggctctgcggggcagctctgttagtggcagcgagaatg
catgatttccgacgcactgttaaagaggtcatcagggtggtcaaggtttgtgagtctacg
ctaaggaaaaggttgacagagtttgaatacacgccaacaagtcagctaaccatagatgag
tttatgaggatcgacttggaagaagaatgtgatcccccttcattcacagctggccaaaaa
aagctgaagatacagcagcttgagaaggcgttatcaaagaagctggaagattttgaaggt
gaaatatcaagctatcaagatgaaatagagattgaattagaaaatagcagaccaaaagca
aaaggcgtatttgcaaatttatctaaaagcgattctatagaagataatacattaagcata
tttggagaggatgaggcagaagatgaagaactggaagcagccgctaatcacttaaacaaa
gacttttgtaatgaacttcttgagaaagacaggttaaaaccaggtgaagatggagaatgc
aaaaatggaaatgaagctcctgtaagaccacctgctctggaatccttacttggtccactt
cccactgcagcaagcctgggcataacagagtctataaaagagtgtatttcctctaaggac
cgagaacctggtggaaatacaggagatggtgaattagatctcagtggaattgacgacagt
gaaatagataggtatatacttaacgaaacagaagctcagataaaagcagagctgtggatg
aaagaaaatgcagattatttgaaggaacaaaaagaaaaggaagcaagaatagcaaaagag
aaagaacttgggatttataaggaacacaagccaaagaaagctgcaaagaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatctca
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtaacacaccaaag
aaagaggatgacagcactgatgacagcaccaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatatagccagccctgtaaacagtgtgggaaaaagattaagacccttg
atttctacacagctggctaaaaaggcagccactgaggaggtgacctttccaaatgcacaa
gcagaagcctctaacttagaaaagccagcgactgtgctagtggagagtggcccagtagct
tataaccttgatgaagaggtggaagaggaagaagcagaagaagaagatgatcactgcatg
agtgcattgcagttaatgggaggaaatgattatggctgtgatatggatgacgacgatggc
tattag
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