Coturnix japonica (Japanese quail): 107315399
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Entry
107315399 CDS
T04297
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04137
Mitophagy - animal
cjo04140
Autophagy - animal
cjo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107315399 (HIF1A)
04137 Mitophagy - animal
107315399 (HIF1A)
04148 Efferocytosis
107315399 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107315399 (HIF1A)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107315399 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
107315399
NCBI-ProteinID:
XP_015721226
LinkDB
All DBs
Position
5:complement(49065197..49094444)
Genome browser
AA seq
835 aa
AA seq
DB search
MGLKANTKTFCMYDNRAFLCWKKRRKLSQSPLELPCRISSERRKEKSRDAARCRRSKESE
VFYELAHELPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGELETEAKMEKELNCFYLKA
LDGFVMVLSEDGDMIYMSENVNKCMGLTQFDLTGHSVFDFTHPCDHEELREMLTHRNGPV
KKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDTCNNQTHCGYKKP
PMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSI
YEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCI
VCVNYVLSGIVQKDLIFSLGQTECMLKPVESPEMKMTKIFSKDDLDDTNSLFEKLKQEPD
ALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASE
TTKPLRSNADPALNREVVSKLEPNTETLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPN
DYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSF
DQLSPLESSSGSQNAATITILQQTQTPSTAADEIKPVAERVDDVKALIVPSSPVHVINDT
SSAPASPYSGNRSRTASPIRAGKGTLEQTEKSCPGAPSLITVTLNKRSTAMDEELNPKML
ALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGNASLAWKRVKACKTNGHNGVEQKTI
ILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggggctgaaagctaatacaaaaaccttttgtatgtatgataaccgtgcctttctgtgc
tggaagaagaggagaaaactttctcagtctcccttagaacttccctgcaggattagttct
gaacgcaggaaagagaagtcgagagatgcagccagatgccgaagaagcaaggaatcagaa
gtgttctatgaactggctcatgaactgcccctgccccacactgtcagcgcccacctggac
aaggcctccataatgaggctgaccatcagctacctgcgcatgaggaagctgctggatgct
ggtgagctggagacagaagccaaaatggagaaggaactgaactgtttctacttaaaagct
cttgatggatttgttatggtgctttctgaggatggggacatgatttacatgtctgaaaac
gtgaacaagtgtatgggactcactcagttcgatttgacagggcacagtgtatttgatttc
actcatccatgtgaccacgaagagctgagagaaatgctaacacacagaaatggtcctgtg
aaaaagggcaaagagcagaacacagagcgcagcttctttctcagaatgaagtgtacattg
accagcaggggaagaacagtgaatatcaagtctgctacatggaaggtactgcactgcact
ggacacatacgtgtatatgacacatgcaataatcaaactcactgtggctacaagaagcct
cccatgacgtgcttggtgttgatatgtgaaccaattcctcacccatcgaacattgaggtc
cccttggacagtaagacgttcctcagtcgtcacagtcttgatatgaaattttcctattgt
gatgaaagaattacagagttgatgggatatgagccagaggaactgctgggtcgttcaatc
tatgagtactatcatgcgctggattctgatcatctgaccaaaacacaccacgacatgttc
acgaaagggcaggtgacaacgggacaatacagaatgcttgctaaacaaggtggctacgtc
tgggttgaaactcaagcaactgttatatacaacactaagaactctcagccacagtgcata
gtatgtgtaaattatgtgttgagtggaattgttcagaaggacttgatattttcccttgga
caaacggagtgtatgctgaaaccagtggagtctcctgaaatgaaaatgaccaaaatattc
agcaaagatgacctggatgataccaacagcctttttgaaaaacttaagcaggaaccagat
gctttaactgtgctggctccagctgctggagacacgattatctccctagatttcagcagc
aatgagtctgatgaacaacaatgtgatgaagttcctttgtataacgatgtaatgctcccc
tcatccagtgagaaattgcagaatataaatatggcaatgtccccactacctgcctctgaa
actacaaagccacttcgtagcaatgctgatcctgcgctcaatagagaagttgtatcaaag
ctggagccaaacacagagacactcgaactttcttttaccatgcctcaggtgcaagagcaa
ccaaccagcccttctgatgcaagtaccagccaaagttcacctgagcccagtagtcccaat
gactattgctttgatgtggataatgacatggctaatgaattcaaactggaattagtggag
aagctctttgcaatagatacagaagcaaaaaatccattctccactcaggagactgattta
gacttggagatgttggctccttacatcccaatggatgatgacttccagttgcgctccttt
gatcagctatctccactggaaagcagttctggctctcaaaatgcagccaccattaccata
cttcagcagactcagacaccatcaacggctgctgatgaaataaaaccagtggcagaacgt
gtggatgatgtgaaggcactaattgttccatcgtctcctgtccatgtaataaatgacacg
agtagtgccccagcatcaccttacagtgggaacaggagtcgaaccgcatctccaatcaga
gcaggaaaaggaacattggaacagacagaaaaatcttgtccaggagcacccagtttgata
acagtcacgctgaacaaaagatctactgcaatggatgaagaactaaatccaaagatgcta
gctttgcataatgctcagagaaaacgaaaaatggagcatgatggttcactttttcaggca
gttggaattggatccttattccagcagacaggtgaccgtggaggaaacgcatcgcttgct
tggaaacgtgtaaaggcgtgtaaaacaaacggtcacaatggagtggagcaaaagacaatc
attctactatcaactgacatagcgagtaaacttctagggcagtcgatggatgaaagtgga
ctaccccaactcacgagttacgattgtgaagtaaatgctcccatacaaggcaacagaaac
ctgctacagggtgaagaactgctcagagctctggatcaagttaactga
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