Coturnix japonica (Japanese quail): 107315427
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Entry
107315427 CDS
T04297
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107315427 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjo02000
]
107315427 (SLC6A12)
Transporters [BR:
cjo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107315427 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
SH
Motif
Other DBs
NCBI-GeneID:
107315427
NCBI-ProteinID:
XP_015721289
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Position
1:52413462..52447818
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AA seq
607 aa
AA seq
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MTRDTTKEAEPNGALVAPEETKKEEMEERGQWSSKVEFVLSVAGEIIGLGNVWRFPYLCY
KNGGGAFLIPYLIFLFTCGIPLFLLETALGQYTSQGGVTAWRKICPIFEGIGYSSLGIEI
YLNIYYIIILSWALFYLFSSFTAVLPWASCNNPWNSDLCVDFLNISNWDNRTVPANATSP
VVEFWEKRVLGLTDGIHNMGTVRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPY
VMLVILLVRGVTLPGAAEGIVFYLKPDVSRLADPQVWMDAGTQILFSYAICLGCLTALGS
YNNYTNNCYRDCIMLCFLNSATSFVAGFAIFSVLGFMAREQGVPIAEVAESGPGLAFIAY
PTAVTMMPASQLWSCLFFLMLIFLGLDSQFVCVESMVTAIIDMFPGVFRKKGRRELLILA
IAVMCYLLGLLLITEGGMYIFQLFDYYAASGTCLIFLAIFEVICVGWVYGANRFYNNIED
MIGYRPWPLIKICWLVFTPGLCLAVFFFSLIKYTPLKYNNSYVYPPWGYMLGWLMALSTM
VCIPLYVIFILLRTKGSLKQRLTLLISPAEDLPQPRKHVVSLSEQKLKEQSLPVQEMLSI
TERETHF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagacacaaccaaggaggcagagcccaatggggcacttgtagctcctgaagag
acaaaaaaggaggaaatggaagagcgaggccagtggagcagcaaagtggagtttgtgctg
tccgtggctggagagatcattggtcttggtaatgtgtggaggttcccatatctctgctac
aagaacggcggtggagcattcctcatcccctacctcatctttctcttcacctgtgggatc
ccactgttccttctggagacagcactggggcagtacaccagccaaggaggggtcactgcc
tggaggaagatctgtcccatctttgaaggaattggatattcctcgctaggcattgagatc
tatctaaacatctactatatcattatactgtcctgggcactcttctacctgttcagctca
ttcaccgcggtgctaccatgggccagttgcaataacccttggaactcagatctctgtgtg
gactttctgaatatctccaactgggacaacagaactgtgcctgcaaacgccacctctcca
gtggttgaattttgggagaagagagtcctgggactaacggatggtattcacaatatgggc
actgtgcgctgggagctggctctgtgtctcctgctggcgtggatcatctgctacttctgc
atctggaaaggtgtcaagtccacaggaaaagttgtgtacttcactgccaccttcccatat
gtcatgctggtcatcctgctggtgcggggagtcacactgccaggtgctgctgaggggatc
gtcttctacctgaagccagatgtctccaggctagcagacccgcaggtctggatggatgca
ggcacacagattctcttctcttacgcgatatgccttgggtgcctgacagccctgggcagc
tacaataactataccaacaactgttacagggactgcattatgctctgcttcctgaacagt
gccaccagctttgttgctggctttgccattttctctgtgctgggcttcatggctcgagag
cagggcgtacccattgcggaagtggctgaatcaggtcctggcctggctttcatagcatac
ccaacagcagtaacaatgatgcccgcgtctcagctttggtcctgcctcttcttcctcatg
ctgatcttcttgggactggacagccagtttgtctgtgtggaaagcatggtgacagctatt
attgacatgttcccgggagtgtttcgaaagaagggacgccgggagctgctgatcctggcc
attgcagtgatgtgctacctgctgggcttactgctgatcactgagggtgggatgtacatc
ttccagctctttgattactatgctgctagcggcacgtgtctgatattcctggccattttt
gaagtcatctgtgtaggatgggtttacggtgccaaccgcttctacaacaacattgaggac
atgattggttatcgaccatggcccttgatcaagatatgctggctggtgttcaccccgggt
ctgtgtttggctgtcttctttttctccctaatcaagtacacacccttgaaatacaacaat
tcttatgtgtacccaccctggggctacatgctgggctggctgatggcactctccaccatg
gtctgcattcctctctacgtcatcttcatcctcctgaggaccaagggatccctgaagcag
cggctcacgctgctgatttccccagcagaggatctgccgcagcccaggaagcacgtggtg
agtctgtccgaacagaagctcaaggaacagtcccttcctgtccaggagatgctcagcatc
acagagagggaaacccatttctaa
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