Coturnix japonica (Japanese quail): 107315451
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Entry
107315451 CDS
T04297
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315451 (WDHD1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
107315451 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
HMG_WDHD1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
HMG_box
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SCAP
HMG_box_2
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
107315451
NCBI-ProteinID:
XP_015721341
UniProt:
A0A8C2T442
LinkDB
All DBs
Position
5:51163613..51192384
Genome browser
AA seq
1121 aa
AA seq
DB search
MLSAQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPDGAPDGILTRFTMNANHVVFNSDGTKIAAGSSDFMVKV
VEVADSSKQQTFRGHDAPVLSLSFDPMDIYLTSASCDGSVRVWKVEDQTCVTNWPLLQKC
NDVINAKSICRLAWQPGSGKLLAIPVDKVVKLYKRETWDNQGDLSDTSITQPLNVVVWSP
CGRYLAAGSVNGSIVVWKVETRECIERMKHEKSYSVCGLAWHPKYEQIAYTDTEGNLGLW
EDIGVGKKPNDKVANTVTKDYEDLFDGDDDDYLNGDMIEPQSSPNAGANEDHGDDDDLMP
TSGHPRKAIIDDDDNSLDIGMIKANSNLLEKEEDDDDDQIGGFKALPMSSTQQPFYDGPR
PTPRQKPFQPGSTPVHLMHRFMVWNSVGIIRCYNDDQDNAIDVEFHDTSIHHATHLPNSL
NHTMADLSTEAILLACESTEELASKLHCIHFSSWDANKEWTVDMPKDEDIEAICLGQGWA
ACATSALLVRLFTVGGVQKEIFCLPGPVVCMAGHGEQLMIIYHRGTGFDGDQCLGVQLVE
LGKKKKQILHGDPLSLTKKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGVGNTWIPVCNTR
EHCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFTLPYCQVTTEKGQM
EEQYWRSVLFHNYADYLSKNGYELDENAKSQPVKEQQELLMKLFALSCKLEREFRCVELA
DLMTQNVVNLAIKYASRSRRLNLAQRLSELAVEKASELATALEDEEEEEDIQAHTNAGYS
TSATEWGRHPGRSAQQDQEVEEAEEADGYEEAEETPEVPKQRTNPFSKAASSEVITPKSA
VIVSSSQGRVNPFKVSSNKKDPLVPSANVLDTMSRYSKKNSSSRAVNKQSSPVIKPLIPK
PKSKQASAASFFQVRTPGSSEKRLGEREEKAGNESPEVQVTAQDNTENKRPKTGFQMWLE
ENRANILTDNPGLNEAEVIKEGMSRFRVLSSEERMVWTEKAKGGAVNDITEDKKRKRPTA
AEDDAKKNEEQKSEDSNASKKKKPLDQSTNVRLSSFAFKQS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagcacagaagccgatgcggtacggacacacggagggacacacggatgtgtgc
tttgatgacagtggcagctgcatcgtaacttgcggcagtgatggagatgttcggatttgg
gaaaacctggatgatgatgatccaaagtccattaatgttggagagaaggcttattcctgt
gctttgaagaatggcagattgatcacagcagtatcaaacaacactgttcagatacacaca
tttcctgatggagctccagatggcatccttacacgttttaccatgaacgcaaaccacgtt
gtgtttaatagtgatggtaccaaaattgctgctggatctagtgacttcatggtcaaagtg
gtggaggtggctgatagcagcaagcagcaaacgttccgaggacatgatgctcctgtttta
agcctgtcttttgaccctatggatatttacctgacatcagcaagctgtgatggttctgtc
cgagtatggaaagtggaagatcagacatgtgtgacaaactggccactgctgcagaaatgt
aatgatgtgataaatgctaaatcgatatgcaggctcgcctggcaacctggcagtggcaag
ctgctggcaattcctgtagataaagttgttaaactgtacaaaagagaaacctgggataat
caaggtgatctgtcagatacttccatcacacagcccttgaatgttgtggtgtggtctcct
tgtgggcgatacctggcagctggaagtgtgaatgggagtatagtggtgtggaaggtggaa
acccgagagtgcatagagagaatgaagcatgagaaaagttattcggtttgcggactggca
tggcatcccaaatatgagcaaatagcttatacagatactgaaggaaatctgggattgtgg
gaagatatcggtgttggaaagaaaccaaacgacaaggttgccaatactgtgacaaaagac
tatgaagatctctttgatggagatgatgatgactatttaaatggagatatgattgaacca
cagtcttccccaaacgctggagctaatgaagatcatggtgatgatgatgaccttatgcca
acgtcaggccatccaagaaaggcaatcattgatgatgatgataactcattagatattggt
atgataaaagctaattccaatctacttgaaaaggaggaggatgatgatgatgatcagatc
ggtggctttaaagctttgccaatgtcatctacacaacaacctttctatgatgggccaaga
ccaacccccaggcaaaagcccttccagcctggttccactcctgtacatctcatgcatcgg
ttcatggtttggaattctgttggtatcattcgttgttacaacgatgatcaagacaatgct
attgatgtagaatttcatgatacctccatacatcatgccacacacctccctaactccctg
aatcacacgatggctgacctctctactgaagctattttgctagcctgtgagagtacagag
gaactcgcaagcaagctccactgcattcattttagctcctgggatgcaaacaaggagtgg
acagtagacatgccaaaggatgaagatattgaagctatctgtctaggccagggctgggct
gcttgtgccactagtgccttgctggttcgactgtttacagttggaggagttcagaaggag
atattctgtctcccaggtccagtggtgtgtatggcaggacatggagagcagctgatgatt
atttatcacagaggtactggatttgatggagaccaatgccttggagtacagctggtggag
ctaggaaagaaaaagaaacaaattttgcatggagaccctctttctcttacaaagaaatcc
tatttggtgtgggttggattctcagcagaaggtaccccgtgttacgtggattctgaggga
attgtgaggatgttgaaccgaggagttgggaacacttggattccagtgtgtaacacacga
gagcattgcaaaggaaaatctgatcattactgggttgttggcatccatgaaaacccccag
cagctcaggtgtattccttgcaaaggagcccgattccctccaacgcttccacgtcctgca
gtggcaatattatcttttacgctcccttactgccaagttacaacagaaaaggggcagatg
gaggagcaatactggcgttcagttctatttcacaactatgcggattacttatcaaagaat
ggctatgagcttgatgaaaatgccaaaagtcagcccgtgaaggagcagcaggaacttttg
atgaagttgtttgctctttcttgtaaactggagcgtgaattccgctgtgtggaacttgct
gacctcatgacacaaaatgtggtgaatttagccatcaagtatgcatcccgctctcgaaga
ctaaatttagctcagcgactcagcgagttggctgtggagaaagcaagcgagttggcaaca
gcactggaagatgaagaggaggaggaagatatccaagctcacacgaatgctggttacagc
acctctgccacagagtggggccggcatccaggcagaagtgctcagcaggaccaagaggtg
gaagaagctgaggaagccgatgggtatgaggaagcagaagaaacgcctgaagtgcctaaa
cagaggacaaatcctttctccaaagcagcctcttcagaggtgattactcctaagtctgct
gtaattgtatcaagcagccaaggacgagtgaatcccttcaaggtgtcatccaacaaaaag
gacccactggtcccctcagcgaatgttctagacactatgagcagatactcaaagaaaaat
tctagcagtcgagctgtaaacaagcagagctccccagttataaagcctctcattcccaag
ccaaagtccaagcaggcttcagcagcgtccttcttccaggtacgtacaccaggctccagt
gaaaaaagactgggagaaagagaagaaaaagcagggaatgagtcccctgaggtccaagtc
actgcacaggacaacactgaaaacaaaagaccaaagacaggtttccagatgtggctagaa
gagaacagagcaaacattttaacagataatcctggtctgaatgaagcagaagtaataaaa
gaaggcatgagtcggtttagagttctgtcatcagaagaaagaatggtgtggactgagaaa
gcaaaaggtggagcagtgaatgatatcacagaagataaaaaacgaaagcgtcccacagct
gctgaagatgatgcaaaaaagaacgaggagcaaaaatcagaggactcaaatgcatccaaa
aagaagaagcctttagatcaatctaccaatgtcaggttgtcatcttttgcgttcaagcag
agctaa
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