Coturnix japonica (Japanese quail): 107315662
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Entry
107315662 CDS
T04297
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315662 (JMJD1C)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107315662 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
107315662
NCBI-ProteinID:
XP_015721697
LinkDB
All DBs
Position
6:complement(7230268..7371398)
Genome browser
AA seq
2357 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAPKQNSHQQ
QQQRNTRPNKRKGSDSSMPDEEKVKEERFDYIGRGENPKNKNKHFLSKRRKPEEDEKKLN
MKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKINGEEGKSQTAERVE
QTLTDRRSPWDEVQEDKKHEEPERLKSSLLDQQEKPSLHAAEQPTPYEQNSKDPHVQECN
AEKHHAVELKSEQFVPKPPTPKSIVDKTNKNNSEKESQDNAASTFGLQTVQKIESHSSDL
KQQFANANFLEARKQEADQSWVSCVVNKMDLIQPGVVKALPVNEHLNPEKEKVQYGSFMS
SLNVASVAEDSKLRKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTPSSDTVKSKVSSQN
SHAPGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQET
GTNHISPFLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLPGSSTQTPLSAINTHPLST
APHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHL
LGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPW
LHQPTPVTSADSLGLLSHIPVRPSSAEPLRPLKLAAHSSPPLSKSIVEHHKEELERKAFI
EPLRSATAAPIKTELEQSRTQAAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRR
ILQESIEVAPFTAKIKALEGERENYPRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSV
PQSLPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCPSTAASPQSLPSYISSLSK
PPPLIKHQPESEGSVSKVAEQLSQSVQSHSVGSFRSDSRSPTQLSVSSSNTLRSMPALHR
APVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQAVY
KGSSEQNLSEAWKSNNAAANEKVNWHVERASGKSQSATASVIVRPPSSTKYESVAAVQPA
SKDRVSERSSAVANQADCLKTAEARETGRVILPNMNSDSARTQYEKKFPAVSQGTVARSV
TPTTAMVCSTKMDVTTSAATTTSVLSWGSSEVTYSLSSTALACTPLESAAPRATGQAAAP
AQECKGSAPAPAAAAPSKAGSAVQPSPGFSTSADFVHLKKHKAALAAAQFRSCNPSETES
NSVKNQTFSTSLSLDSAIVCNTINKANSVGSGQTSQASQPNYHTKLKKAWLTRHSEEDKN
TNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKAKRTYES
GSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQRKKGDAEEEVKPNGVLSRSAKEKSKL
KLQSGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGE
EPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETCK
YILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKC
GFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNI
RDKFEIKSHCQCTSKQNMQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESEQQNTPPKSE
ANGNASPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKLSKEEKDQD
SLESQNCKSSPTASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGR
TMPNILDDIIASVVENKIPPNRAPKINVKSEVKDEPKEDRKCIQDDGNKLYSDIQYSWIC
DKHVLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADIL
NCKDSIISNTNVKEFWDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYEDLLK
SLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVV
NILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIR
EFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAG
ALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEM
VRALKIHESEMEDMEEN
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccatactccttaaatggttatagggtgagagtgtacagacaggattctgcc
acccagtggtttactgggatcattactcaccatgatctcttcacccgcactatggttgtt
atgaatgaccaggtattagaacctcagaatgttgatccttctatggttcagatgactttt
ctagatgacgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccgg
cggtctcgttccaaccagaacagcaacacagttcacggtcattatacacgtgcacaagca
aatagtcccagaccagcaatgaattcccaaactgcaccaaaacagaactctcaccagcag
cagcagcagaggaatactaggccaaataagcggaaaggttctgatagcagcatgcctgat
gaagagaaggtgaaggaggaaagatttgactatataggtcgaggagaaaaccccaaaaac
aaaaataaacacttccttagtaaaagaagaaaacctgaggaggatgaaaagaaattaaat
atgaagagactgcggacagacaatatctcagattactctgagagcagtgactcagaaatc
tcaaataaaagattaactgattcatcctcagagcagaactcagagaatgagttaaaaagc
aagaacacttcaaagataaacggggaagaaggaaagtctcaaactgctgagagagtagaa
cagacactaacagataggcggtctccgtgggatgaagtacaggaggataaaaaacatgaa
gagccagaaaggctgaagtcatcgctcttagatcagcaggaaaagccctcgctccatgca
gcagagcagccaacaccttacgagcagaattccaaggatccacatgttcaagagtgcaat
gcagaaaaacatcacgctgtggaattaaaaagcgagcagtttgtacccaaacctcccact
ccaaaaagcattgttgataaaactaacaaaaacaactctgaaaaggagagccaggataat
gctgcaagtacctttggattgcaaacggttcagaaaatagaatctcacagcagtgattta
aaacagcagtttgcaaatgcaaatttccttgaagcacgaaagcaggaagctgatcaaagt
tgggttagctgtgttgtaaacaagatggatttgatacaacctggtgttgtgaaagcatta
ccagtaaatgaacatttaaatcctgaaaaagaaaaagtgcagtatggctcgtttatgtct
tcgttaaatgtagcttctgtagcagaagacagtaaactgcgtaaacaaagtccagtccct
gattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgat
gttaagcctaaattcaccccatcttctgatactgtgaagtctaaggttagttcccaaaac
agccatgctcctggattaacaaggtcagccaataaaacagatcatgatttgcctaggtct
agttttcatccagttccagctagagttagcgctctagaagctactaaaagtcctcttatc
attgacaagaacgaacatttcacagtgtacagggaccccactctgattggacaagaaaca
ggaactaatcacatttcaccttttttgcatcagcataattatcctctgcattcctcatcc
caccgaacctgtttaaatccaaatgctcatcatcctgcattaactggttcatcccatctg
ctgcctgggtcttcaactcagacccctttgtctgctattaacactcacccccttagtacc
gctcctcaccattccgttcatcaccctcatctacttcctgcagtgttgcccggagtgcct
gctgcctccttgctgggtggccacccgcgactagagactgctcatgctagcagcctaagc
catttggcattagcgcaccagcagcagcaacagatgttacaacaccagtctccacatctt
ctcggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttgg
cagtatccaaatggaacacatgcttactcaggactcggcctgccctcctcgaaatgggtc
cacccagaaactcctgttaacgcagaggcttccttgagaaggaatactcccagcccatgg
ttacaccagcccacccctgtgacctcagctgacagccttggattgctgagtcacattcct
gtgcgaccatccagtgcagaacccctgcggcctctcaaactggcagcacattctagcccg
ccgttgtccaaaagcatagtagagcatcacaaagaagagctggagaggaaggcgtttatt
gaacctttacgttctgctacggctgcaccaataaagacagagctggagcagagcaggacg
caagcagcgaaggagagccatatgcacagacattttgcagatccaatgttgaaccagctg
ccaaggccgccacaggagacgggggagcgactgagcaaatacaaagaagaacacaggcga
atacttcaagaaagtattgaagttgctccttttacagctaaaataaaggcactggaggga
gagagagagaactatcccagggtaacgtccttatcttcgagtcccaaaagccattcagta
aagtacgacaaggatgctgaacgctctgtgtcagaactgtacaaaatgaagcattcggtc
ccacagagtttgccacagagcaactatttcaccaccttgtctaatagtgtggtgaatgaa
ccaccaagatcttacccgtccaaggaagcttcaagtgcatacgttgataagcagactaat
tgtccttcaacagcagcaagtccccagtctcttccttcttacatttcttctctctcaaag
cctccccctttaattaagcaccaacctgagagcgaaggctctgtgagcaaagtagctgag
cagctttcacagtcggtgcagtctcattcggttggttcttttagaagtgacagcaggagc
cctactcagttgtcagtctcatcttcaaatacactccgaagcatgcctgccttgcacaga
gcgcctgtgtttcacccccctgtgcaccagaacctggagaagaaggaaagcagctacagc
agcctttcacctcccactctgacccctgttcaacctgttaatgctggtggtggtaagata
caggaactgcagaaaccaccaaccttagtacctgaacctaaggaagctcaggctgtttac
aaaggctcttctgaacagaatttatcagaagcgtggaagtccaacaatgctgctgctaat
gaaaaagtgaactggcacgttgagagagcgagtggaaagtcacagtctgccacagcatct
gttattgtgcgtcctccttcgagcacgaaatacgagagcgtagcagcggtgcagccagct
tccaaagatcgagtcagcgagagatcttcagctgtggcaaatcaagcggattgcctgaaa
acagcggaagccagggagactggaagagtcattctgccaaatatgaactcagacagtgct
cgcacacagtatgaaaagaaatttccagctgtctcacaaggcaccgttgctcgttctgtc
acccctaccacagctatggtctgcagtaccaaaatggacgtgaccacatcggcggccaca
actaccagtgtgttgagctggggcagctcagaagtgacttattccttgtcaagcacagcc
ctggcctgcacaccactggagagtgctgccccgagagccacaggtcaggcggcagcaccg
gcccaggagtgcaagggcagcgctccagcaccagctgcagccgcccctagcaaggcaggc
agcgctgtgcagcccagcccggggttctccacctctgccgacttcgtccatttgaaaaag
cacaaggcagcactggccgcagctcagtttagaagttgtaaccccagcgagaccgagtcc
aactctgtgaaaaatcagacattttcaacctctctctccctagacagtgctatcgtctgt
aataccataaacaaagcaaactctgtaggcagtgggcaaacttcccaggcgagtcagcca
aactaccacactaaactgaaaaaggcttggctgacaaggcattcagaggaggataaaaac
actaataaaaaagagaattcagggaacagcgtttcagaaattattaagccatgtactgtc
aatttaatagcttctacatcaaatgatttgcaaaataacatagatagtaaaatcttggca
gataagtttgtgaaggaagataagcaccctaggaggaaagcaaaacgaacttacgagtct
ggctctgaaagtggagactctgatgaaagcgagagcaagtcagagcaaaggactaagcgg
cagcccaagccaacttacaaaaagaaacagaacgatttgcagaggaaaaagggtgatgcg
gaggaagaagtaaaaccaaatggtgttcttagcaggagtgccaaagagaaaagcaagctg
aagttgcagagcggcagtaacagcactggaatacctcgctcagtgttaaaagattggcgc
aaagtgaagaagctgaagcaaacaggagagtccttcttgcaggatgattcgtgctccgaa
attggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaagaagggcgaa
gaaccaactcactcaccggtgttctgtaggttttattactttcgacggttatcttttagt
aaaaatggagtggttaggatagatgggttctcctctcctgatcagtatgatgatgaggca
ctgagcttatggacgcatgaaaactatgaagatgatgaactggacctggaaacttgtaaa
tatattttagatatcatcggggacaagttttgtcagctggtaacatccgagaagacagcc
atgtcctgggtgaaaaaagacgccaaaattgcatggaagagagcagtgaggggagtccgt
gagatgtgtgatgcatgtgaagccacattatttaacattcactgggtctgccaaaaatgt
ggatttgtggtctgcctggattgttacaaggcgaaggaaagaaaaagttccagagataag
gaactgtacgcctggatgaagtgtgtgaagggccagcctcatgatcacaagcacctgatg
ccaacacagattatcccaggctctgttttgacagatcttctggatgctatgcacaatatt
agggacaagtttgaaataaaatcgcactgtcagtgtaccagcaagcaaaacatgcaagct
ggcaagctcccagcaatgaacggcgtgtctcaggttttgcagaacgtccttaatcacagt
aataaaatttctctgtgcatgcctgagtctgagcagcagaatactcctcccaagtctgag
gcaaacggcaatgcgagtccgaggagcgatgtcagcacagacagcaagctaacgccaccc
gaatcgcagtcaccactgcattggttagctgatcttgcggagcagaaagccagagaggaa
aagaaagaaaacaaagagtgtccttctggaaaactttcaaaggaggagaaagaccaggat
agtttggagtcccaaaactgtaaaagctcccctactgcatcccagaacaatgagcagggc
tcaaccttacgagatctgttaacaacaacagcaggcaaactgcgtctgggttctacagat
gctggtattgcttttgctccggtttactctacgggaacagcgagtggcaagagtggcagg
actatgccaaacattcttgatgatatcattgcttcagtggtagaaaacaagattccaccc
aatagggcaccaaagattaatgtaaaatctgaagtaaaagatgagccaaaggaagacaga
aaatgtattcaggatgatggcaacaagttgtacagtgatattcagtattcttggatctgt
gataaacatgttttgtggctcagagaccataaaaacagcaacaactggaaactcttcaaa
gaatgctggaaacaagggaggcctgttcttgtgtccggaatgcataagaaaatgaacttc
agcctgtggaaagctgagtccattagtcttgattttggaaaccagcaagctgatatcttg
aattgcaaagacagtattatttcaaacaccaacgtcaaagagttctgggacggttttgaa
gacgtttcaaaacggcagaaagtaaaaaatggagaaacagcactactgaaattgaaagat
tggccttctggtgaagatttcaaagctatgatgccagcaagatatgaggacttactgaaa
agtttacccttgcctgaatattgtagtccagaagggaaattaaatctggcatctcatctg
ccaggattttttgtccgtccagatttaggacccagactatgcagtgcatatggtgtggct
gctactaaagatcatgatataggaactacaaatctccatatagaagtttcagatgtagtg
aacatcctcgtttatgttggcatagcgaaaggaaatggagtactttccaagtcaggagta
ctgaagaagtttgaagaagaagatttggatgacctcttaaggaagcggttaaaagattca
agtgaattgcctggtgctttatggcatatttatgctggcaaagatgctgacaagatccga
gagtttctgcagaagatagcaaaagagcaaggcttagaagttttaccagagcacgatccg
atacgtgatcagagttggtatgtgaacaagaaacttcgccaaagacttcttgaggaatat
ggtgtgaaaacgtgtacggttattcagtttctcggtgatgctattattctaccagcagga
gctcttcatcaggtgcaaaactttcacagctgcgttcaagtaaccgaagactttgtgtct
ccagaacatcttgtacagtcgtttcacctaacacaggagctgaggctgtcaaaggaagaa
atcaattacgatgataaactgcaggttaaaaatatcttgtatcatgcagttaaagagatg
gtgagagctttgaagattcatgaaagcgaaatggaagatatggaagaaaactga
DBGET
integrated database retrieval system
