Coturnix japonica (Japanese quail): 107315713
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Entry
107315713 CDS
T04297
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjo03009
]
107315713
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315713
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107315713
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107315713
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107315713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
107315713
NCBI-ProteinID:
XP_015721819
LinkDB
All DBs
Position
6:8799612..8807253
Genome browser
AA seq
844 aa
AA seq
DB search
MAAHTAALIPLTTAREPRALPGVPPERTRQPRPGTRYPVSGTRFRGVPGRGKRAEGTAVV
CRRKGRCSGXMGAAWCRAARLVVPAVRAAAPPYSRLCAGWAAPGPLPLLPVAAVSSRGPA
PLLAPHFLLAGAGRAPWGRGGGAGARSVSELCGELPAAMPAAGPAASPAEPQAPADAEQL
RRGRRRKMKEDAKGRKPKRVEKLKRRGEDEGEQSAAEENGTGDGGGQPPAAKKAKKSADG
NGAAQQDGNAPVSGHGAEPAAQQPGGDAEELTEEAREGAFSNFPLSQNTVNLLKARGVKY
LFPVQVKTFQPIYDGKDLIAQARTGTGKTFSFAIPLTEKLQSVSRDERRGRSPKVLVLVP
TRELAIQVAKDFKNLTRKLSVACFYGGSPYKEQLDLLKSGIDILVGTPGRIKDHIQNSKL
DLSNVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYDVAKK
YMKGEYEQVDLIGKKTQRTATTVEHLAIQCHSSQKAEVLGDVIQVYSGSNGRTIVFCETK
REANELALNSALKQEAQSLHGDIPQKQREITLKGFRNGAFEVLIATNVAARGLDIPEVDL
VIQCSPPKDVDSYIHRSGRTGRAGRTGICICFYQRREEDLLKQVEQKAGITFRRIGVPSA
TDIVKASSDDAKKCLYAVPSSAIDYFRQAAREIIEEKGAVDALAAALAHISGASSIQQRS
LLNSAAGFVTMVLQCSIEMRSMSYAWRGLKEQLGEEIDSKISAMRFLKGKMGVCFDIPMD
ELNNIQEQWRDTRRWQLAVAKELPELEEQPQDSSRRPQPRFGGFKKNGRFGGWQQGRPAG
AAVE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcacacagccgcactcatcccgctcaccacagcgcgggagccgcgtgctttg
ccgggtgtccccccggagcggacgaggcagccgcggcccggtacccggtatccggtatcc
ggtacccggttccggggcgttccgggccgggggaagcgggcggaagggaccgcagtcgtg
tgccggcggaaggggcggtgcagcggcntgatgggcgccgcgtggtgccgtgcggcgcgg
ctcgttgtgccggcggtgcgggcggcggccccgccgtactctcggctgtgtgccgggtgg
gccgcgcccgggccgctcccgctgctgccggttgcggctgtatcgtcccgcggccccgcg
ccgctcctcgctcctcacttcctgctcgcgggggcggggcgcgctccctggggccgtggc
ggtggggcgggagcgcgttccgtctccgagctgtgcggggagctgcccgccgccatgccc
gccgccggccccgccgccagccccgccgagccgcaggcacccgcggacgccgagcagctc
cgccgcggccgcaggaggaagatgaaggaggacgccaagggcaggaagcccaagcgggtc
gagaagctgaagcggcgcggggaggatgagggagaacagagcgcggcggaggagaacgga
acgggcgacggcgggggccagccgcccgcagccaagaaggcgaagaagagcgcggacggg
aacggcgcggcccagcaggacggcaatgcgcccgtatccggacacggcgccgaacccgcg
gcccagcagcccggcggcgatgctgaggagctgacagaagaagccagagaaggcgctttc
tccaattttcctctctcccaaaacaccgtcaacctgctcaaagctcgaggtgtaaaatac
ctgtttcctgtgcaagtgaagacttttcagcccatatacgatggcaaagacctaattgct
caagctcggacaggaactgggaaaaccttttcttttgctattccactgaccgaaaagctt
cagagtgtctcacgagatgagagaagaggccgttcaccaaaggtgctggttctggttcca
accagggaattggctattcaggtcgccaaggacttcaagaatctcacaaggaaactctca
gtggcgtgtttttatggaggatctccatataaagagcagttggatctccttaaaagtggt
attgatattcttgtgggaactcctgggcggatcaaagaccacattcagaatagcaagctg
gacctttccaacgtgaagcatgttgttttggatgaagttgatcacatgttagacatgggt
tttgctgaacaagtagaagaaatcttaggatttgcttataaaaaaggttctgagaacaac
cctcagacattgctgttttctgcaacttgtccacgctgggtatacgacgtggcaaaaaaa
tacatgaaaggtgaatatgaacaggtagacctgattggaaagaagactcagaggactgcc
acgactgtggaacacttggccatacagtgtcactcgtcacagaaagcagaagttcttggg
gatgtcattcaagtctacagtggaagtaatgggcggacaattgtcttctgtgagacaaaa
agggaagcaaatgagttggctttgaattctgcgctcaaacaggaggcccagtcattgcac
ggtgacattccacagaagcagagagaaattacactaaaaggcttcagaaatggtgcattt
gaggttctgattgcaacaaatgtagctgcccgtggtttggatattcctgaagttgacctg
gttatacagtgctcaccaccaaaggatgtcgattcctacatccatcgttctggacgtacg
ggtcgtgctggccggacagggatctgtatttgtttctatcagaggagagaagaagacctt
ctgaagcaggttgagcagaaagcgggcattacgttcaggcgtataggtgttccatctgct
acagatatagttaaagcttcaagtgatgatgctaagaagtgtttatatgccgttccttct
tctgcgatagactacttcaggcaggcggctcgagagatcatagaggagaaaggggcagtt
gatgccctggcagcagctctagcccatatttctggggcatcttccatacagcagcgttcc
ttactcaactcagctgcgggctttgtgactatggtgttacagtgctctatagagatgcgt
tccatgagctacgcctggagagggctgaaggagcagcttggcgaggaaatagacagcaag
atatctgccatgcgtttcctcaaggggaagatgggggtgtgcttcgatatccccatggat
gagctgaataacatacaggagcagtggcgggacacgcggcgctggcagctggcggtggcc
aaggagctgccggagctggaggagcagccgcaggactcgagccgcaggccgcagccgcgc
tttggcggcttcaagaagaacgggaggttcggcggctggcagcagggccggccggcaggg
gcagccgtcgagtga
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