Coturnix japonica (Japanese quail): 107315716
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Entry
107315716 CDS
T04297
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjo03009
]
107315716
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315716
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107315716
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107315716
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107315716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
107315716
NCBI-ProteinID:
XP_015721821
LinkDB
All DBs
Position
6:8789701..8799154
Genome browser
AA seq
760 aa
AA seq
DB search
MAAARPGRHRFPGWSPFLSRRADRRDAMPEATRIRAGSGAESEPESPMESEAAPESSRRK
RKKEKKEKKEKKSKRDDKVRKKKPQTDESEQSEEESSSPKLKKAKTGGKQNGHVGEESPE
NARLSAASAKSTHKKQRSNSSESSIDGDSDQEQEQEMTEEQKEGAFSNFPISKGTIQLLQ
ARGVTYLFPVQVKTFQPVYSGKDVIAQAQTGTGKTFSFAIPLIEKLQVDSEERRRGRPPK
VLVLAPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLIRSGIDILVGTPGRIKDH
LQNGKLDLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCPNWV
YDVAKKYMKSKYEQVDLIGRRTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTI
VFCETKKDANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLD
IPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEESQLRYVELKSGITFKR
VGVPTATDIIKASSKDAIRCLDSVPLTAIEYFKESAQLLIEEKGPVNALAAALAHISGAT
SIEQRSLLNSDVGFVTMVLRCSEEINNISYIWRKLREQLGDDVDRKVNRMCFIKGRMGVC
FDIPAADQKDIEERWEDSKQCSLCVANELPELEESQRGGRGGGGGGGRGGGGRGGRGGRG
GGGGKNRSFSGSRNGRQGGSGRSRSRNRGQKRSYDKAFDR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcccgcccgggtcgccatcgttttccgggctggtctccattcctgtcccgg
cgtgctgaccggagggacgcgatgcctgaggccacccggatccgcgccggcagcggggct
gagtcggagcccgagagccccatggagagcgaggccgcgccagagagcagccggaggaag
cgcaagaaggagaaaaaagagaagaaagaaaagaaatccaagcgggatgacaaggttcgg
aagaagaaaccacagacagatgaaagtgagcagtcggaagaggagagcagctcgccaaag
ctcaagaaagcaaagaccggagggaaacaaaatgggcacgtgggagaggagagcccggag
aacgccaggctgtctgctgccagtgccaaatccacccataagaaacagcgcagcaactcc
agtgaatcgtccatcgatggggacagtgaccaggaacaagagcaggagatgactgaagag
cagaaggagggtgctttctccaatttccctatctccaaagggaccattcaacttcttcag
gctcgaggagtgacatacctgtttcctgtgcaagtgaagaccttccagccagtatattct
ggcaaagatgtaattgctcaagcacaaactggaacagggaagactttctcttttgctatt
cccctaattgaaaagcttcaggtggactcggaggaaagaagaagaggccgtccaccaaaa
gttctggttcttgctccaacaagagagttggcaaaccaggttgccaaagatttcaaggac
ataacgagaaagctcacagtagcttgtttttatggaggaacgccatataatggacaaatt
gatctcattagaagtggaattgacattttggttgggacacctggtcgaatcaaagaccat
cttcagaatggcaagctggaccttaccaaggtgaaacatgttgttcttgatgaagttgac
cagatgctggacatgggatttgctgaacaagtggaggacatcttacgggttgcgtacaag
aaggattctgaagacaatccccagacgttactgttttctgcaacatgcccaaattgggtg
tatgacgtggctaaaaaatacatgaagtctaagtatgagcaggttgacctgattgggaga
agaactcaaaaggctgctacgacagtagaacatttggctatagagtgtcactggtctcag
agggctgcggttattggagatgtcattcaggtctacagtggaagccacgggaggaccatt
gtattttgtgaaaccaaaaaggatgcaaatgaactggctctgaatgcttcgatcaagcag
gactgccagtcattgcacggtgacattcctcagaagcaaagagagatcacgctgaaaggt
tttagaaatggtgcatttaaagttctggttgcaaccaatgtagctgcccgtggcttagat
atccctgaagttgacctggttgtccaaagttcaccaccaaaggatgtggagtcctacatc
catcgttctggacggacggggcgagctggccgcactggaatctgtatctgtttttatcag
cgaaaggaagaaagtcagctaagatatgtggaattaaaatcgggcattacgttcaagcgt
gttggtgttcctactgcaacagatataataaaagcttccagcaaagatgctatcagatgc
ctggattctgttcctctaactgctattgagtatttcaaagagtctgctcagttgctaata
gaagaaaagggaccagttaatgctttggctgcagctctagcacatatttcaggtgctact
tccattgaacagcgctccctgctgaactcagatgtgggatttgttacgatggtactgcgc
tgctctgaagaaataaacaatataagctacatttggcggaaactacgggaacagctgggt
gatgatgttgacagaaaggtgaacagaatgtgtttcatcaagggaagaatgggtgtgtgc
tttgatatccctgcagcagatcaaaaggacatagaggaaaggtgggaagattcaaagcag
tgcagtctgtgtgtggcaaatgaattacctgagctggaagaatcccagagaggaggaaga
ggaggaggaggaggaggaggaagaggaggaggaggaagaggaggaagaggaggaagagga
ggaggaggaggaaagaacagaagcttctcaggctccaggaatggacggcagggtggctca
ggcagaagcagatccagaaacagaggccagaaacggagctacgacaaagcatttgatcgc
tga
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