Coturnix japonica (Japanese quail): 107315835
Help
Entry
107315835 CDS
T04297
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107315835 (ZSWIM8)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107315835 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
107315835
NCBI-ProteinID:
XP_015722120
LinkDB
All DBs
Position
6:complement(13387123..13448961)
Genome browser
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDHFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMMSPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAETACEAGRAHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPSVRSSSTAKKSTKDPVGEMGSGDDDLTSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLVTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGCRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSTAAIQQLPGTSVAQQAGVSPAVQSSPETFVEK
SSQESSQRSPCEPAGESTVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQIVGGTPAQREGATGCSASGAR
AASEAARGLTDNRVTTEPTTVTVAAAVTAAATVMPVISMGSTMYQQHTMAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQSVHPAFIGAQYPYSVTTPS
LAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPAIQGASLTSLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYQVGMLALEMLGRRTQSDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLNPFVLQDIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQVYLQYIHYRLIHLAPADYDDFVNAIRSARSAFCLTPVGMMQFNDILQNL
KRGKQTKDLWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcggagtgggaggacggggagaggttctccttcgaggactccgat
cactttgaggaggactccctttgttccttcatctcagaggcagagagcctttgccagaac
tggagaggatggcggaagcaatcggccggacccaattctcccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactgtctgcaaaacaggttgcatttcacattccattt
gaggtcgtggaaaaagtttatcctccagttcctgagcaactacagcttcggatcgccttc
tggagtttccctgaaaatgaggaagatattaggttgtactcgtgtttggctaatggcagc
gcagacgagttccagagaggggagcagctattccgagtgagggcagtcaaagaccctctc
cagataggtttccatctgagtgccactgtggtacccccacagatgatgtctcccaaaggt
gcatacaatgtggcggtgatgtttgaccgatgcaggatcacatcatgcagctgtacctgt
ggagctggggccaagtggtgtgctcacgtcgtggcgctctgtctcttccggatacacaat
gcatctgcggtatgcttacgagcacctgtttctgagtccttgtctcgactacaaagagac
caattgcaaaaattcgctcagtacctaatcagtgaacttccgcaacagattcttccaact
gctcagcgtctgctggatgagctgttatcttctcagtcaactgcaatcaacacagtgtgt
ggagctccagatcccactgctggaccctctgcatcagatcaaagcacctggtacctcgat
gaatctaccctgagtgacaacataaagaaaacccttcataaattctgtgggccctctcct
gttgttttcagtgatgtaaattccatgtatctctcttccacggagccaccggctgctgct
gagtgggcctgtcttctgcgtcccctgcgagggagagagcctgagggaatctggaaccta
ctttctattgtgcgggagatgtttaagagacgggatagcaatgctgctcctttgctggag
attctgactgaccagtgtctgaactatgagcagataaccggctggtggtacagtgtgcgg
acatctgcgtcacacagcagtgctagcgggcacacgggacgcagcaatggccagtcagaa
gtagctgctcatgcctgtgcaagtatgtgtgatgagatggtggttctttggagactggct
gtccttgacccaactattagtccacagaggcgcagggacctttgttcccagctcaggcaa
tggcagctgaaggtcatagataatgttaagagaggtcagcacaagaaatcactggagaaa
ctattccagggtttcaagccagcagtggaagcctgttacttcaactgggaggaagcttat
cctatccctgggatcacctacagcagcactgacaagaaaaactcattctgttgggtaaaa
gccatccaacagaggagctgccggttgcagtgtgcagaaactgcttgtgaggctggtaga
gcccatggacaagagcctgggggaccatgtctgcagcctggggacaggctgcgtccctca
ccccaggagccagcggttcgtcctaaggaacttactggaaagcgcaaagttgtctctgaa
acaccccagagagttctgagacgactttcagcagaaggtgataaagctgtgtataaaact
gcagtgagcaaagctaagttgccagtgagcaaaggtttgaccagtaagcatagtgggaaa
cgccgcatgagtagtgaagacagctccctggagccagacttagcagagatgagcctggat
gacagcagcttggctctgggtgcggaagccagcaatacattcagttttacagaaagccca
ctgagcaggagctacagggatgcctttgaggaggatggtggggtgtacttctctgaggga
cccgaacccagtgtcaggagcagttccacagccaagaaatcaaccaaggatcctgtggga
gagatgggtagtggtgatgacgacctgacttctgcagatgaaaacagtggtggtgtgagc
ctgaaaccagaagaagtaggagagaatggtgcggcaggtggaggtgatgatggggaagag
gaagatgattaccaggtatactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaaatgaagaagagcaggatatatttgctggaataaagcctctggag
caggagaaccggatggagatcctgtttgcctgtgcagaagccctgtatgcacatgggtac
agtaatgaagcatgtcgcttaactgtagaacttgccagggacctattagccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtatcaaccagcaag
caaacatggatggcaaccaacaccttgtccaaagctgctttcctgctgactgtgttgagt
gagcgactggagtaccacaacctggccttccgaataggaatgtttgccctggagctgcag
agaccacctgcctctaccaaggcactggaggtgaagctggcatatcaggagtctgagatt
gcagccctcttgaagaagattcccttggtcactaatgagatgaatactattcgaggaaga
gctgaagaactgcgagaaggaacgttatgtgattatcgtcctgtcctgcctctcatgttg
gctagttttatatttgatgtcctatgcgctccagtggtttctcctacaggctgtagaccc
ccaagtcgcaattggaataatgaaatgcctggagatgaagagcttggttttgaagcagct
gttgctgctcttggcatgaagacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcactcgaagggagaagggagatctggcactagccctgatgattacttacaaggatgat
caatccaagctgaagaagattttagacaaacttctggacagagagagtcagactcacaag
ccacagacactgagttccttctactcttccagcaagcctacagtagcaaatcaaaagtct
ccttccaaacatgctgcccagtccactgcagctatccagcagcttccagggacttcagtt
gctcagcaagctggtgtaagcccagcagttcagagcagtcctgaaaccttcgtggagaag
agttcacaggagagctctcagaggtccccctgtgagccagctggggaatccactgtcttg
aaacaggagggaaaggtgcccagtcgtctggcccttggaaacagaggtggctacaatggg
agatgctggggttcacccgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaactacctctgacagttctccaacgctcagtcggcgtcccctacgt
gggggatgggcaactacgtcctggggcagaggacaagacagtgacagcatcagcagttct
tcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaaaactgtagaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccgaaccagccttcagaggcagcagcccacttctactttgaactggccaagaca
gtccttatcaaagcaggtggaaacagcagtacttccatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtat
gcactagggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccat
gtctcctggatcacagggcaggccatggagattggtagtgcagccctgaacatcttagtg
gagtgttgggatggacatctgaccccccctgaggtggcatcattggcagacagggcctcg
agggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgtctgccc
cacgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgcaaggaacag
gacaatctgatgctggaaaaggcctgtatggcagtggaagaggcagccaagggaggcggc
gtgtaccccgaagttctctttgaagtagctcaccagtggtactggctttatgaacagatt
gttggtgggactccagcccagagagaaggtgctactggctgcagcgccagtggtgcacgg
gctgcatcagaagcagcacgtgggttgacagacaaccgggtgaccactgagccaaccacc
gtgacagtggcagctgcagtaaccgcagcagcaacggtcatgccagtgatctctatgggg
tcgaccatgtaccagcagcataccatggcaggaccagcaatggcgcatacacacacccag
ggcctccacccttacaccacccttcagactcacattccctgtaatccccagtatattgga
cacactatccagcacatgccacgtccagctgtcttcccagtgcctggctcagcgtaccca
cagagtgtccatccagcattcataggagcgcagtacccctattcagtaacaacaccatca
ttggcagctacagcggtgtcattccctggtgtgccagtcccatccatgacgcagatagca
gtgcatccctaccacagtgaaactggactgtcactgtcttccaatgtagcgataggaagt
gtccatgcaggatcaacgttcccagcaattcagggggcttccttgacatctctgtcctca
cagcccaactccctcgttacaggggggtttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactccgcataccaagttgggatgctggctctg
gagatgctcggccgaagaactcagagcgaccatcccaacaatttctcccgcagcccaccc
tacacagaggatgtaaaatggctccttgggttggctgcaaagctaggtgtaaactacgtg
catcaattttgtgttggtgcagccaagggagtgctgaacccttttgtgcttcaggatatc
atcatggaagctctgcagaggctcaatcccgcgcatgtgcacaaccacctgcgcacccca
gccttccaccagttggtgcagaggtgccagcaggtctacttgcagtacatccattaccgg
ctgatccatctcgctccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccgtgggcatgatgcagtttaatgatattctccagaacctg
aagcgtggcaagcagacaaaggatctgtggcaaagggtctctttggaaatgaccaccttc
tctccgtga
DBGET
integrated database retrieval system
