Coturnix japonica (Japanese quail): 107315852
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Entry
107315852 CDS
T04297
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107315852 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107315852 (KCNMA1)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
107315852 (KCNMA1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
107315852
NCBI-ProteinID:
XP_015722159
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All DBs
Position
6:11061585..11474507
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AA seq
1310 aa
AA seq
DB search
MANGSGGGSYPGGSGGGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSKS
RTADSLIPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFT
VPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTA
AGFIHLVENSGDPWENFQNNQQLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFIL
GGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRD
DVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKY
CADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAEL
KLGFIAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLS
FPAVCELVFAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEV
KRAFFYCKACHDDITDPKRIKKCGCKRLIYSKMSIYKRMKLACCFDCGRSERDCSCMSGS
VHSNMDTLERAFPLSSVSVNDCSTSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMR
HDPLLIPGNEQIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIF
GDVKSALIGLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPL
SRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQ
GFTPPGMDRSSPDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHI
LMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTL
IRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCY
GDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFD
HNAGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTKTRDSREKQNATRMNRMGQA
EKKWFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcggcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggtcactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacacaggcagatggggcctgc
aaaccaacagatgaaaaagaggagaacgtggcagcagaagtgggatggatgacctctgtg
aaagactgggcaggagtcatgatttctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaagagc
cgtactgcagactcattgatcccaatagaatcctgccagaatttctacaaagatttcaca
ttacagattgacatggctttcaatgtgttcttccttctctactttggcttgcgtttcata
gcagccaatgacaagctatggttttggctagaagttaactcagtagtagatttcttcacg
gtccctccagtgtttgtttcagtatatttaaacagaagttggcttggtttaagattttta
agagcccttagactgatacagttttcagaaatattgcagtttctgaatatccttaaaaca
agtaattccatcaagctagtgaatctgtgctctatatttatcagcacatggctgacagca
gctgggttcatacatttggtggagaactcaggggatccttgggaaaatttccaaaataat
caacagttaacctattgggaatgtgtttatttactgatggttacaatgtccactgttggt
tatggagatgtttatgcaaaaacaacccttggtcgccttttcatggtcttcttcatcctt
gggggattggccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatatggtggttcctatagtgcggttagtggaagaaagcacatagttgtctgtggt
cacataacacttgaaagcgtgtccaacttcctgaaggacttcctgcacaaggatagggac
gatgtcaacgtagaaatcgtctttctgcataatatctcccctaaccttgagctggaagct
ctttttaaacgacacttcactcaggtggaattttatcagggttcagtccttaatccccat
gacctggcaagagtaaagatagagtcagcagatgcgtgcctaattcttgccaataaatac
tgcgctgacccagatgctgaggatgcatccaatattatgagagttatttcaataaagaat
tatcatccgaagataagaattatcactcagatgctacagtatcacaataaggctcatcta
ttaaatattccaagctggaactggaaagaaggggatgatgcaatctgtctcgctgagctc
aagctgggtttcatagctcagagttgcctggcaccaggcctttcaacaatgttagccaac
ctcttttccatgagatcattcataaagattgaggaggatacgtggcagaaatattatctg
gaaggagttgcaaatgaaatgtatacagaatatctgtctagtgcctttgtgggtttgtcg
ttccctgcagtttgtgaactggtgtttgcgaaactaaagctcttaatgatagccatagaa
tacaagtcggaaaaaagagaaagcagaagccgaaagcgtatattaatcaatcctggaaac
catgtcaagattcaagaaggtaccttaggattcttcattgcaagtgatgccaaagaagta
aaaagagcatttttttactgcaaggcctgccatgatgacatcacagatcccaaaaggata
aaaaagtgtggctgcaaacggctgatctattccaagatgtccatctacaagagaatgaaa
ctggcatgttgttttgattgcggacgctctgagcgtgactgctcttgcatgtcaggcagt
gtacatagtaacatggacacccttgagagagccttcccactttcttctgtctctgttaat
gattgctccaccagtttacgtgcctttgaagatgagcagccgtcaacactatcacccaaa
aaaaagcaacgaaatggaggcatgcgaaattcacccaactcctcacccaaactgatgagg
catgaccccttgttaattcctggcaatgaacagattgacaatatggatgccaatgtgaaa
aaatatgactctacaggaatgtttcattggtgtccagccaaggatattgaaaaggtcatt
ttgacgcgaagtgaagcagcgatgacagttttaagtgggcatgtagtcgtttgcatattt
ggggatgttaaatctgctttaattggattaagaaatttagtgatgccactacgagccagc
aactttcactaccatgaactcaagcacattgtgtttgtgggttcacttgaatacctgaga
agggaatgggagacactgcataacttccccaaggtttcaatcttgcctggtacgccatta
agtcgggctgatttaagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtca
gccaatcagaataatattgatgatgcttcgctgcaggacaaggaatgcatcttggcgtca
ctcaacatcaaatctatgcagtttgatgacagcattggggtcttgcaggctaattcccaa
ggctttacaccccctggtatggataggtcatctccagacaacagtcctgtccacggcctg
ttacgtcaaccctccattacaacaggagccaacatccctattataacagaactagctaag
cctggcaaacttctgcctttggtttcaatcagtcaggaaaaaaacagtggaacccacatt
ctaatgataactgaactggtaaatgattcaaatgttcagttcttggaccaagatgatgat
gatgacccagacacagaactgtacctcacgcagccctttgcatgtggaaccgcatttgct
gtcagcgtgctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactg
atacggacattggtaacaggaggagccacaccagagctggaagcactgattgctgaggaa
aatgctttgagaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcga
gttgctcagttggctttgtatgatgggccatttgcagacctaggggatggaggctgttac
ggagatttattctgtaaagcactgaaaacttacaatatgctttgctttggaatttatcga
ttaagggatgctcatctaagtactcccagccaatgcaccaaacgttatgttatcacaaac
ccaccatatgagtttgagcttgtgccgacagacttgatcttctgtttgatgcaattcgac
cacaacgctggccagtcccgggccagtctttctcattcctcccattcttcctattcatcc
agcaagaagagctcctcagttcactccatcccatcaacagcaaaccgaccgaaccgcacc
aagacgagggattcccgggaaaaacagaatgcaacaaggatgaatagaatgggccaagca
gaaaagaaatggtttacagatgagccggataatgcctatcccagaaacattcaaatcaag
cccatgagcacccacatggccaatcagatcaatcagtacaaatcaacaagcagcttgata
ccaccaatcagagaagttgaagatgaatgttga
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