Coturnix japonica (Japanese quail): 107315898
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Entry
107315898 CDS
T04297
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107315898 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315898 (ERCC6)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107315898 (ERCC6)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107315898 (ERCC6)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107315898 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Helicase_C_2
SesA
Motif
Other DBs
NCBI-GeneID:
107315898
NCBI-ProteinID:
XP_015722308
UniProt:
A0A8C2U5Q0
LinkDB
All DBs
Position
6:complement(16144986..16185384)
Genome browser
AA seq
1495 aa
AA seq
DB search
MPTENNHLPDSIQEQDSITTVSNVCPHDTEESGTEHENGICNSDEGNRFEVHNYDSKPST
SVAVPLEVPKRGQPLLHINRQQIQSVSYSAQAAELKGLGVDVYDQDVLEQGVLQQVDDAI
NEANKAAKIADAEKEYQSVLDDLRSCTTSLKQIDKIIEQLSPQAANNKDISRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAVLGGTEILDKVNEIEFEDEEPGPSSLGSMLMPIQETEWEE
LIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFEKYLADQAKLSSERKKLALRRGVKKKA
RAKNVQCIAPTSATKEKRGKALSKTDKRLKKHLKKLQKHALQVHSKAGIPKEKKNLETMK
LKPGQEDDSGESEYVPDEEHLDAEAAEDVEEQVSSHAENDSDYELRNLSRKGKYSVKQDS
KDAGSDADYFPSSEEEEHTEGKHKVKRWRDDGDEDYYKQRLRKWQRERLKDKEHPVAEEL
SDESDTEFEEGFKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAF
LAGLSYSKIRTRGSNYRYQGLGPTVIICPATVMHQWVKEFHTWWPPFRVAILHETGSYTN
KKVKLIREIASCHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQF
RTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK
TAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRRVYQNFIDSKEV
YQILNGDMQVFSGLVALRKICNHPDLFSGGPKILKCVPDADLEEADQFGYWKRSGKMIVV
ESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRERNYSYLRMDGTTTIASRQPLITRYNED
KSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLT
AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFAG
TGSDVQVPKHQLKRKLERSADDDALKGGLHLKKSSSPKYSKSSGSHLTSHVVNSSKATET
GEEAKGNLETFDQKSCAKDNAQTATNMNSLNKSKQESLERADISLSQPLHGDTESSENTT
VTKEEHEVANENVEGDFGLLCGAADSQEKQVDKTGDVQVDNNHYKCTSKTKHRVDMQSHD
SHKEKSKKKHHKDAKFEGERIPHLVKQKRYRKEDSEEKELDPKKNDDYVLEKLFKKTGVH
SVMKHDAIMEASSADYVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTGMSGLSGA
PSRVKSRFGQKRNPMLLSSHSTCASPVKKCKDADTMKKENVKKNSSNGHFDGKSETGESS
SSVLDSSSLLAKMRARNHLILPQRTGNEGDENLNQAPAPAPGSTEYDELLVDVRNFIAFQ
ARVDGEASTQEILQEFESKLPVAQTCVFRELLRNLCSFHRNPNGEGVWRLKPEFR
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagaaaacaaccacctaccagacagtattcaagaacaagactccattactact
gtaagcaatgtttgccctcatgatactgaggaatcaggaactgaacacgaaaatggcatt
tgtaacagtgacgagggtaatagatttgaagttcacaactatgacagcaagccatccact
tctgtggcagttcctctggaggtgcccaaaagaggacaacctcttttacatatcaacaga
cagcagattcagtccgtttcatacagtgcacaggctgctgagctcaaaggtttaggagtt
gatgtgtatgaccaggatgtattggagcaaggagttctccagcaagtagatgatgcaatt
aatgaagctaacaaagcagcaaaaatagctgatgctgaaaaagaatatcagtcagttttg
gatgacttaagatcatgtacaacatctctgaaacaaatagataaaattattgagcaactt
tcacctcaggctgccaacaacaaagatataagcagaaaactagattctgtaaaacggcaa
aaatacaacaaggagcaacagctaaagaagatcaaagcaaaacagaaacgtctccaagca
gttcttggtggaactgagattcttgataaagtaaatgaaattgaatttgaggatgaagaa
cctggaccatcatctcttggcagtatgcttatgcccattcaggaaacagagtgggaagag
cttattcgtacaggccagatgaccccatttggaactaaaatacctcagaagccagagagg
aagacacggcgactaatgctaaatgaagcatctgattttgaaaagtatttagcagatcaa
gctaagctgtcatctgagagaaagaagttagcccttcgcagaggagtgaagaagaaagca
cgagccaaaaatgttcagtgcatagctcccacatctgctacaaaggaaaagagaggtaaa
gctctgtcaaaaacagataaacgtttaaaaaaacacttgaagaaacttcagaagcatgcc
cttcaggttcattcaaaagcgggtattccaaaagagaaaaaaaatcttgagactatgaag
ctgaagcctggacaggaagatgatagtggagaatctgagtatgtacctgatgaggaacat
cttgatgcagaagcagctgaagatgtggaagaacaggtgtcttcacatgctgaaaacgat
tctgattacgaactcaggaatttgtcaagaaagggaaaatactcagtgaagcaggattct
aaagatgctggaagcgatgctgattattttccaagctctgaggaggaagaacatacagaa
gggaagcacaaagtaaagagatggagagatgatggagatgaagattattataaacagaga
ctaaggaagtggcaaagagaacgtttgaaggacaaagaacatcctgttgctgaggaactt
tctgatgaaagcgacactgaatttgaagagggtttcaaaattccgggatttctcttcaaa
aagctttttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccagcag
gcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgccttc
ttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccaagga
ttgggtccaacagtgatcatttgtccagctactgtgatgcatcagtgggtaaaagaattc
cacacgtggtggcctccatttagggttgccattctccatgaaactggttcttacaccaac
aaaaaggtgaaactaattcgagaaattgcttcatgccatggaattttaattacgtcttat
tcatacattcgactgatgcaagataacatccacagctatgactggcattatgtgattttg
gatgagggtcacaaaatccgaaatccaaatgccgctgtcacacttgcgtgcaaacagttc
cgcacaccccatcgcatcatcttgtctggttcccctatgcaaaataacttgaaggagctc
tggtccctctttgactttgtattcccagggaaactgggaacactacctgtgtttatggag
caattttctgttccaataaccatgggaggatactccaatgcctctcctgtgcaggtaaaa
actgcatacaaatgtgcttgtgtgttgcgggacaccataaacccttacctgctgcgaaga
atgaaggctgatgttaaaatgagcctttcacttcctgataaaaatgaacaggtccttttt
tgtcgtttgacagatgagcagcgtcgagtctatcaaaatttcattgactctaaagaggtc
taccagattctcaatggagacatgcaggttttctcaggacttgtagctttgaggaagatt
tgtaaccaccctgacctcttctctggtggtcccaagattttgaaatgtgtaccagatgct
gacttggaggaagcagatcagtttggttattggaaacgttctggaaaaatgatagtggta
gagtccttgctgaaaatatggcacaagcaaggtcacagagtgttgtttttcactcagtca
agacagatgctgcagattcttgaagtctttgttagagaaagaaactattcctacctcagg
atggatggtactacaacaatagcatccagacaaccacttataacaagatacaatgaggac
aaatccatatttatttttcttctgacaactcgtgttggtggtattggagttaacttgact
ggtgctgaccgggttattatttatgatcctgactggaatcccagtacggacacacaggct
cgtgagcgtgcttggagaataggtcaaaagaaacaagtgactgtgtacagacttctcact
gcaggtactattgaagagaagatataccacagacaaatcttcaagcagtttttaacaaac
agagtgctgaaagaccctaagcaaaggcgctttttcaaatccaatgatctttatgagcta
tttactctgagcagcccagatgtgtctcaggggacagaaacgagtgcaatttttgcaggt
acaggttcagatgttcaagtccccaaacatcaactgaaacggaaacttgaaaggtcagct
gatgatgacgctttgaaaggtggtctccatctaaagaaaagcagctcaccaaagtacagc
aagtcatctggttcccacttaaccagccacgtggtaaattcttctaaagcaacagagacc
ggtgaggaagccaaaggaaatttggaaacttttgaccaaaagagctgtgcaaaagataat
gcacaaactgctactaatatgaattcattgaataaaagcaagcaagaaagcttggaaaga
gctgatatatctctgtcccaaccattgcatggtgatacagagtcttcagagaacaccacg
gtgactaaggaagaacatgaagtggctaatgaaaatgttgagggagattttggccttctt
tgtggtgcagctgactctcaggaaaagcaggttgataaaacaggggatgtgcaagtggat
aataatcattataaatgtacctcaaaaacaaagcacagagtggatatgcaatcacatgac
agccataaagagaagtctaagaagaagcatcacaaagatgccaagtttgaaggggagcgt
attcctcacctggtgaaacaaaagcgctacaggaaggaggacagtgaagagaaggagtta
gacccaaagaaaaatgatgattatgtcttggagaaactcttcaagaaaacaggggtgcac
agtgtaatgaagcacgatgccattatggaagcttccagtgcggattatgtgctggtagaa
gcagaagcaaacagagtggcccaggatgcactaagagccttaaaagtctctcgacagcga
tgcttaggagctgcttctggtgtgccaacatggacgggcatgagtggtctttcaggagca
ccatcaagagtaaagagtcggtttggtcaaaaaagaaaccctatgctgctttcttcacat
tccacttgtgcatcacctgtcaaaaagtgcaaggatgcagatacgatgaagaaagaaaat
gtgaagaagaatagttccaatgggcactttgacggaaaatcagaaactggagaatcatca
tctagcgtattagattcttcatccttattagctaagatgagggcgagaaaccaccttatt
ttaccacaaaggacagggaatgagggagatgagaatcttaaccaagcaccagctccagcc
ccaggctcaacagaatatgatgaattgctggtggatgtgcggaactttattgcgttccag
gcccgtgtggacggtgaggctagtactcaggaaatactgcaggagtttgagtccaaactg
cctgtggcacaaacttgtgtctttagagaactcctccgcaatctctgcagctttcataga
aacccaaatggtgaaggtgtctggaggctgaagccagagttccgctga
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integrated database retrieval system
