Coturnix japonica (Japanese quail): 107315965
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Entry
107315965 CDS
T04297
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107315965 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107315965 (TAF5)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107315965 (TAF5)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107315965 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
107315965 (TAF5)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107315965 (TAF5)
STAGA complex
107315965 (TAF5)
TFTC complex
107315965 (TAF5)
SAGA complex
107315965 (TAF5)
SLIK complex
107315965 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
107315965
NCBI-ProteinID:
XP_015722408
UniProt:
A0A8C2UBQ4
LinkDB
All DBs
Position
6:20663337..20673311
Genome browser
AA seq
788 aa
AA seq
DB search
MAAVPEEPAEVAAVKPDPEAGTPPQPPAAPSAAATAAPPAPSAAAADGEAAGSAGDASSA
KPSAPGPAASPASLDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDIGNAALSPAGAG
LPGAPGGEGDASSSEALLSRVTAATAISIGGGVAPVASSSPGVAAAAAVPPGKVGGGVVV
EDQPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELV
YNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRD
SYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKV
FFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKRDSVGSKSKKQDPNAPPQNRIPLPEL
KDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADS
TVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFS
PDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW
ATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPI
HSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMD
NTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLL
AAGAYSSQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtacctgaggagccggcggaggttgccgcggtgaagccggaccctgaggcg
gggacgccaccgcagccccccgccgctccctccgccgccgccaccgcagccccccccgct
ccgtcggccgccgcggcggatggggaggcggcggggagcgctggggatgcgtcgtccgcc
aagccctcggcaccgggcccggccgcctccccggcgtcgctggaccggcagactctggtg
gccgtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcggcgt
gaggcccggctgctcggagaggacatcggaaacgccgccctcagccccgccggtgccggg
ctcccgggagccccggggggcgagggggatgccagcagcagcgaggcgctgctcagccgg
gtcaccgccgccaccgccatctcgattggaggcggcgtcgcccccgtcgcctcttccagc
cctggggtggcggcagcggccgcggtgcctccggggaaagttggaggaggtgttgttgtg
gaggatcagccagatgtgagcgcagtgctgtctgcctacaatcagcagggggacccaacg
ctgtacgaggagtactacagtggtttaaaaaacttcattgagtgttccctggactgtcat
cgagccgaactgtctcagctgttttatcctctctttgtgcacatgtacttggagttggtc
tacaatcaacatgagagtgaagctaagtctttttttgaaagatttcatggggatcaggaa
tgttattaccaagatgacctccgtgtattatccagcttaaccaaaaaagaacacatgaaa
ggtaatgagaccatgctggatttccgaacaagcaagttcgttctgcgtatttcccgtgac
tcttaccagctcttgaagaggcatcttcaggaaaagcagaacaaccagatctggaacatt
gttcaggaacatctctacattgatatatttgatggaatgccccgtagcaaacaacagata
gatgctatggttggaagcttggctggggaggcaaaacgagaggcaaataaagcaaaggtt
ttcttcggcttattgaaagaaccagagttcgatgtgcctttggatgatgaagatgaagaa
ggagaaaacgaggaaggaaaaccaaagaagaagaaacctaaaagagacagtgtaggatca
aaaagtaaaaaacaagaccctaatgctcctcctcaaaacagaattcctctgcccgaactg
aaagactcagataaactggataaagtgatgaacatgaaggaagctgccagacgtgtgcgt
cttgggccagagtgtctgccttccatctgcttctacacattccttaatgcttatcagggt
ctaactgcagtagatattacagatgactccagcatgattgtaggaggctttgctgactct
accgtcagagtgtggtccgtgactccaaaaaagctacgtagtgtgaaggcagcagcagac
ctcagtctaattgacaaagaatcagacgatgtcttggagaggatcatggatgagaaaact
gcaagtgagttgaagattttatacggtcacagtggacctgtctatggcaccagcttcagt
cctgataggaactacctgttgtcctgttctgaggatggtactgtcagattgtggagcctc
caaacattcacttgtctggtgggatataaaggacacaactatccagtatgggatacgcag
ttctctccttatgggtattattttgtgtcggggggacatgacagagtggctagactgtgg
gcaacagatcattaccagcctttacggatatttgctggccaccttgctgatgtgacgtgt
actcgatttcaccctaactccaactatattgccactggctcagcagacaggactgtacgg
ctgtgggatgttttaaatgggaattgtgtaagaatattcactggacataagggtccgatt
cattcattggcattttctcctaatggacgattcctggctactggagcaacagatggcaga
gttctgctgtgggatattggacatggtttgatggttggagaactgaaagggcacactgac
actatctatgcgctccgattcagtagagatggggagatcttagcatcaggttcaatggat
aacacagttcggctgtgggatgcagtgaaagcatttgaagacttagaaacggatgacttt
actacagccactggacacataaacttgcctgaaaactcccaggacttgttactgggtaca
tacatgaccaaatcaactccagttgtacaccttcattttacacgcaggaacttgctgctg
gctgcaggagcctacagttcacagtag
DBGET
integrated database retrieval system
