Coturnix japonica (Japanese quail): 107316001
Help
Entry
107316001 CDS
T04297
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107316001 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107316001 (EXOSC1)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107316001 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107316001 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
107316001
NCBI-ProteinID:
XP_015722494
UniProt:
A0A8C2UDU3
LinkDB
All DBs
Position
6:19503644..19505317
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPARYCVPGERLCGADGNAAGSGTYVRNGNIFAALSGCVRRCERDGALPVVSVVRDAE
AQLLPDVGSVVTCKVCSINSRFAKVNILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSDAGVQMVPISWCEMQCPQTHTK
DFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaccagctcggtactgcgtgcccggagaacggctgtgcggagcggacggaaac
gcggcggggagcggcacctacgtgcggaacggcaacatcttcgctgcgctgagcggatgc
gtgcggcgctgcgagcgggacggggcgctgcccgtggtgtcggtggtgcgggatgcagag
gcgcagctgctgcccgacgtgggctccgtggtgacgtgtaaggtgtgcagcatcaactcc
cggtttgccaaagtgaacatcctgtacgttggctccacgccgctgaaatccaccttccgt
ggcaccatacggagggaagacattcgagctactgaaaaggataaggtagaagtctacaag
agtttccgccccggtgacatagtcctggccaaagtcatctcgctgggggatgcacagtcc
aactacctgctgagcacggcagagaacgagctgggtgtggtggtggcacgcagcgacgca
ggggtgcagatggtgcctatcagctggtgtgagatgcagtgcccacagacgcacaccaag
gacttccgtaaggtggcccgtgtgcagcctcagttcctgcagacatag
DBGET
integrated database retrieval system
