Coturnix japonica (Japanese quail): 107316030
Help
Entry
107316030 CDS
T04297
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107316030 (HPS1)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
107316030 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
107316030
NCBI-ProteinID:
XP_015722566
LinkDB
All DBs
Position
6:19404517..19409211
Genome browser
AA seq
703 aa
AA seq
DB search
MRCVLISSTAAELLFYWADAAFLRRLRPSAATAAQGPALEDSLNTLLAPLIISCTALLEK
LSDTYTCFRAEGGRHLYVLHMFGDCLYIAVNGDGTESEDDLRRSLFVLRRLVEVHCGLVT
LDAHLIRKELRPADSERRERIWSLLRGLLETYIHLREEDQSFAVEAVERLIHPQLCEQCI
EFLERQVVQHINSSPERGGDEVGHAFLLVHTKLLAFYSSRNASSVRPTDLLTLILLVQDL
YPSQSAEEELGPQPAAGKLLPQGPKRSESIPVSNPGSHGATEKESDDQQDTDDLSAPEVY
YTPEPSPGRQSTGSESWSESLELVGDGDADAADVQMAEDLLQTLSPLLPEASNPRRIFLE
ANLRDGSCLLLPHTMHCLPLWPGISLILLTKGPTSHVAVTLHQLLDGFLVLEKKLEEGQE
VGASRAHPFLAELRQRMDKFVKKLSGQDMQLQNAWVEFKNKIFSRSETGSTLELLHALGT
VKRQLCSVYRQLFLTPTSHSLSQGLRDRAQKLMREKLLDWRDFLLVKSRRNITMVSYLED
FPGLVHFIYVDRTAGQMMAPSLSVTEKSSSELGKGPLAEFVRNKVWSLIALARRYLQKGY
TTLMLQDGDYCCSYFLWFENELGYKLEVMEVPVLSDDSAPIGMLAGDYYRKLLRYYSKNQ
QTDMVKCYELLTVHLGIIPSELVVQQACNLAQRLWEPSRIPLL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcgtgctcatttccagcaccgcggccgagctgctcttctactgggccgatgcc
gccttcctccgccggctgcggccgtccgccgccaccgccgcgcagggcccggcgctggag
gacagcctgaacacgctgctcgcgcccctcatcatctcctgcaccgcgctgctggagaag
ctgtcggacacctacacctgcttcagggctgaaggcgggcggcacctctacgtcctgcac
atgttcggggattgcttgtacatcgcggtgaacggcgacgggacggagagcgaggacgac
ctgcgcaggtcgctcttcgtgctgcggcgcctggtggaggttcactgcggcctcgtcacg
ctcgatgcccacctcatccgcaaggagctgcggccagcagattcagagcggcgggagcgc
atctggagcctgttgagggggctgctggagacatacatccacctgcgggaggaggaccag
agctttgccgtggaggcggtggagaggctgatccaccctcagctgtgtgagcagtgcatc
gagttcctggagaggcaggtggtgcagcatatcaactccagccccgagcgtggtggggat
gaggtgggacatgccttcctcctggtgcacaccaagctgctggccttctactccagccgc
aatgccagctctgtccgccctactgacctgctcaccctcatcctcctggtgcaggacctg
tatcccagccagagcgctgaggaggagctcggcccacagcctgcagcagggaagttgttg
ccgcaaggacccaagagaagtgagagcatccctgtgagcaaccctggctcccacggagct
acagagaaagagtcagatgatcagcaggacactgatgatctctctgcacctgaagtctac
tacacacctgagccctcaccaggcaggcagagcacaggcagtgagagctggtcagagagc
cttgagctggtgggtgatggggatgcagatgctgcagatgtccagatggcagaggacctg
ctccagacattgagccctctgctcccagaagcttcgaaccccaggaggatcttcctggag
gccaacctgcgggacggcagctgcctcttgctgccacacaccatgcactgtctcccgctg
tggcctggcatctccctcattctcctgaccaagggccccacgagccacgtggctgtcacc
ttgcaccaactgctggatgggttcctggtgctggagaagaagctggaagaggggcaggag
gtgggggcatcccgtgcccacccctttctggctgagctgcggcagcgcatggataagttt
gtgaagaagctgagtgggcaggacatgcagttacagaacgcctgggtggaattcaagaac
aagatattctctcggagtgagactgggagcaccttggagctgctgcatgcgctgggcact
gtgaagcgacagctctgctctgtatatcgccagctcttcctcacccccaccagccatagc
ctgtcccaaggcctgcgggaccgagcccagaagctgatgagggagaagcttctggactgg
agagacttcctgttggtgaagagcaggcgcaacatcaccatggtgtcatacctggaggac
tttcctggcctggtgcacttcatctatgttgaccgcacggctgggcagatgatggcacca
tcgctcagcgtgacagagaagtccagctcagagctgggcaaggggccactcgctgagttc
gtcaggaacaaggtgtggtccctgatcgcactggcccggcggtacctgcagaagggctac
acgaccctcatgctgcaggatggtgactactgctgctcctacttcctctggtttgagaat
gagctgggctataaactggaggtgatggaggtgccggttctctctgatgactctgcgcct
atcgggatgctggcaggggactactacaggaagctgctgcgttactacagcaagaaccag
cagacggacatggtgaagtgctacgagctgctgactgtgcacctgggcatcatcccgtcg
gagctggtggtccagcaggcctgcaacttggcccagcgcctctgggagccctcccgcatt
cccctgctctga
DBGET
integrated database retrieval system
