Coturnix japonica (Japanese quail): 107316144
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Entry
107316144 CDS
T04297
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
107316144 (SHOC2)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
107316144
NCBI-ProteinID:
XP_015722858
UniProt:
A0A8C2UC34
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Position
6
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtcccatcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagaaagcaaagag
aaagagcccaagaccaaagggaaagatgccaaagatggaaagaaagactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctgtcaaa
gagttaacgcagttaacagaactttatttatacagtaacaaactgcagtctctaccagca
gaggtgggctgtcttgtgaacctgatgacactggccctgagtgagaattcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
ctgagagagattccttccgtggtgtatagactgacttccctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagctgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagttgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctatccagtttaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgaactgaacctggagaacaacaatatttct
actttaccagagggtcttttatccagccttgtcaagctgactagtttaacgctggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aacatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctccccttggactttggcact
tggactagtatggtagaactgaacttagcgactaaccaactcacaaagatccctgaggat
gtgtctgggcttgtttctcttgaggttcttatattgtcaaataatctccttaaaaaacta
ccccatggaattggaaatctccggaaactccgagaacttgatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttcccagaggtattggtcaccttaccaatctgactcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccactcagccaccttccgcctcagatt
gttgcaggaggaccttctttcatcattcagttcctaaagatgcagggaccataccgtgcc
atggtctga
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