Coturnix japonica (Japanese quail): 107316154
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Entry
107316154 CDS
T04297
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjo03016
]
107316154 (TRUB1)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107316154 (TRUB1)
Transfer RNA biogenesis [BR:
cjo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107316154 (TRUB1)
Prokaryotic type
107316154 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
107316154
NCBI-ProteinID:
XP_015722879
UniProt:
A0A8C2YGX0
LinkDB
All DBs
Position
6:24936093..24966343
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AA seq
283 aa
AA seq
DB search
MATGELGGRSAEKLFSLSGLFAVYKPKGRTSAAVLNLLKERLLAEAGVQTKHNKRKRQAL
KIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGRATDTLDATGKVTEEK
PYDQVTKTDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYS
LSLQQFQPPLFTLDIECGGGFYVRSLVSDIGKELSTCASIQELTRTKHGPFTLEEHALHE
DRWTIDEIAQSLEHCMSLFPGEQSHKKFKTELPEETAVSREDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggggagctgggcggcaggtcggctgagaagctcttctccctgagcgggttg
ttcgctgtctacaagcccaaggggcgcacctcggccgccgtgctcaacctgctgaaggag
aggctgctggcagaagctggtgtgcagacaaaacataacaaaaggaaaaggcaagccttg
aaaattggacatggtggaactttggatagtgcagctacaggagttctggtggttggtatt
ggaaagggaacaaaattgctgaaaactatattggcaggttccaagaagtacactgccatt
ggactactgggcagagctactgatacgttagatgctacaggaaaagtaactgaagaaaag
ccttatgaccaagtaacaaaaacagatcttgagaatgtgctgcagaagttcacaggggac
ataatgcaggttcctccactctattctgctttgaagaaggatggagaaaggctatcaact
ttaatgaagagaggagaagcagtggaagcaaagcctgctcggccagtaagagtctacagc
ctctctctgcaacagttccagccaccactgttcacactggatattgaatgtggtggcggc
ttttatgtcaggagcctggtcagtgacattggcaaagaactttcaacctgtgccagcata
caagagctgacccgaaccaaacatggaccgtttacgctggaggagcacgcgcttcatgaa
gacagatggacaattgatgaaattgcacaatccttagagcattgcatgtctcttttccca
ggagagcaatctcataaaaaatttaagacagagcttcctgaagaaactgctgtgagccgt
gaagataagtga
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