Coturnix japonica (Japanese quail): 107316250
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Entry
107316250 CDS
T04297
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107316250 (PARPBP)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107316250 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
107316250 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
107316250
NCBI-ProteinID:
XP_015723009
LinkDB
All DBs
Position
1:56803163..56844962
Genome browser
AA seq
575 aa
AA seq
DB search
MISFQQKILNLIKYFRRQWPLFSNSERTTVCGADCMLTALQLSMAEVNKQHYGDFTVSLS
DVMETWKYLLHDKLGLSYENMEEPENYADFKKAYHTFLASSNMLDIIDIYQKCHDLALVS
EDESIAPVQLLEFISGVTKVSDSNGSVLPSTPVNGQDQSRVKVMLFAKKCFYSYLSLLVN
SKDDLALARILNVPDRGLDREAFTKLKHASQERKMSIFLMATSFIRTVEHGGKGFSASLF
DPLRAHVKGLSNFINFVDKLGEIVGEIPDPRIAGGQILSTVKTHLMKGRSNGDPFYQAVE
EVVQDLDLKIKNIIDSQHEVLTASTTGVSPTRPKLHSINHGTVYCGRDTIKVLLVLLDKE
AVSAPTQNKAELLYDDLNLNMFGITSFLTLFRSPEQSKESSPKPLRQRIQISVDEKIIKM
KQSSIKSQFACTYKNEPSKIRGQQFLSSSRMPACIHPAAKQRLKEGMNSHLDIPVLGTIS
ENVNQNRNYREMGKLSCQPKSKNSKNEQMDLNNDNVIYDEESETSLPKNAKKRKTSNNLQ
KELDSKVDGKRKNNRTASKNKLIVGQAKLTQFFKL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttccagcaaaagattttaaacttaatcaaatatttcagaagacaatggccc
ttattttcaaactcagaaagaactactgtgtgtggagcagattgcatgctgacagcatta
caactgtccatggctgaagtcaataaacagcactatggagatttcacagtatctctcagt
gatgtgatggaaacttggaaatatttgttacatgacaaactaggattatcgtatgagaac
atggaagaacctgaaaattatgctgactttaaaaaggcctatcataccttcttagcaagc
agcaatatgttagatataatagacatatatcaaaagtgccatgatcttgcacttgtgtct
gaagacgaaagcatagcccctgttcaactgctagaatttatttctggtgtaacgaaagtg
tcagacagtaatggttctgttcttccttctacaccagtcaatggacaggatcagagcagg
gtgaaggtgatgctctttgccaagaagtgtttttattcgtatttaagcctgttggtgaat
tctaaggatgatctggcattggctcgtattctaaatgttcctgacagaggacttgataga
gaagccttcactaagttaaagcatgcctcacaggagagaaaaatgtcaattttcctgatg
gcaacatcttttatccgaacagtagaacacggaggaaaaggcttttcagcttcattattt
gatccactaagagcccacgtaaaggggctttctaacttcattaattttgttgacaagctg
ggagaaattgttggtgaaatcccagatccaagaatcgcaggggggcaaattctgtcaaca
gtgaagacgcatttgatgaaaggccgaagcaatggggatcctttctatcaggcagtagag
gaagttgtacaagatttggatttgaagattaaaaatattatcgattcacaacatgaagtc
ttgactgctagcaccactggagtcagtccaacacggccaaaattgcattccataaaccac
ggcactgtatattgtggcagagatactataaaggtcctactagttcttctggataaagaa
gcagtcagtgctcctacccagaacaaagcggaattattatatgatgatttaaacttaaat
atgtttggaatcacctcttttttgacactcttcagatctccagaacagtctaaagaatct
tctccaaaacctcttagacagcgtattcagatatctgtggatgaaaaaataattaagatg
aagcaatcttcaatcaaatctcagtttgcatgtacatacaaaaatgagccgagtaaaata
aggggtcagcaattcctcagcagtagccgaatgccagcctgcatacatcctgcagcaaag
cagcgtttaaaagaaggtatgaattcacatcttgacataccagtgcttggaactatttct
gaaaatgttaatcagaatagaaattatagagaaatggggaaattgagttgtcagccaaaa
agcaagaactccaagaatgaacagatggatctgaataatgacaatgttatctatgatgaa
gaaagtgaaacatctttgccaaaaaatgctaagaaacgtaagacttcaaacaaccttcag
aaggaattggacagcaaagttgatggaaaaagaaagaacaacagaactgcaagcaagaat
aaattgattgttggtcaggcaaaattaactcaattttttaaactgtaa
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