Coturnix japonica (Japanese quail): 107316388
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Entry
107316388 CDS
T04297
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107316388 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107316388 (HDAC4)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107316388 (HDAC4)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107316388 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
107316388
NCBI-ProteinID:
XP_015723266
LinkDB
All DBs
Position
7:2888630..3075583
Genome browser
AA seq
1086 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPTSVPMDLRLDHQFPMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGLPA
TGPSSGGSAQQDAERLAIPALQQRISLFPGTHLTPYLSTTALERDGGTTHNPLLQHMVLL
EQPTAQTPLVTDWYLSGLPLHAQSLVGGERVSPSIHKLRQHRPLGRTQSAPLPQNAQALQ
QLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPNEPARQHESHPEETEEELREHQALLEE
PYSDRVSSQKDVPGLANVVQVKQEPIESDEEEVEPQQELESGQRQAEQELLFRQQALLLE
QQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVY
DTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEA
HTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCV
IELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVD
WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGL
DPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTK
QLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME
KVIEIHSKYWHSLQRYASTVGYSLIEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPM
EEEPPL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatgggctttctggcagagaccagccagtagagctgttg
aatccacctagagtgaaccacatgcccagctctgttgatgtgagcacagcactgcccttg
caagttgccccaacctcagtcccgatggatctgcgcctggaccaccagttccccatgcct
gtgacagagccaacgctccgtgagcagcagctgcagcaggagctcctggccctgaagcag
aagcagcagatccagaggcagatcctcattgctgagttccagcggcagcatgagcagctc
tcccggcagcacgaggcccagctgcacgagcacatcaagcagcagcaggagatgctggca
atgaagcatcagcaggagctgctggagcaccagaggaagctggagcagcaccggcaggag
caggagctggagaagcagcaccgagagcagaaacttcaacagctgaaaaacaaagagaaa
ggaaaggagagtgcagtggcaagcacggaagtaaagatgaaattacaagaatttgtctta
aataagaagaaggctttggcacaccggaatctcaaccactgcatttccagtgaccctcgc
ttctggtacgggaagacacagcacagctccctggaccagagctccccacctcaaagtggc
gtatctggcacctacaatcaccctgtcctggggatgtatgattccaaagatgacttccca
ctcagaaaaacagcatccgaacccaacctgaaattacgatccagactaaagcagaaagtt
gctgaaagacggagcagcccgctgttgcgcaggaaggatggcccggtggtcactgctctg
aagaagcgcccgctagatgtcacagactctgcatgcaacagtgctcctggatctggtccc
agctctccaaacaacagctccaataacataagcgctgagaatggaattacaggatcagtc
acgagtattcaagcagagaccagcctggctcaccgactggtgaatcgcgaaggctccgta
acgcagcttccactctacacgtctccttctttgcccaacatcacactaggactgcctgcc
accggcccttccagtggaggatccgcgcagcaggatgctgagagacttgctatcccagcc
ttgcagcagcggatctctttatttcctggcacccacctcactccctacttgagcactaca
gcgttggaaagagatgggggaaccacacacaaccctcttctgcagcacatggtcttactg
gagcagccaactgcacaaactcccttagtcacagactggtatctttcaggactgcccctc
cacgcacagtctctggttggtggagaacgggtctccccttcaatacacaaactccggcag
catcgcccactggggcgcacgcagtctgctccccttccccagaacgcccaggccctccag
cagttagtgatccagcagcagcaccagcagttcttggagaaacacaaacagcaattccag
caacagcaactgcacatcaacaagataatatcaaaacccaatgagccagctcgccagcat
gaaagccacccggaggagacagaagaagagcttcgagaacaccaagcccttttggaggag
ccatacagcgacagagtctcaagccaaaaggatgtcccagggctggctaatgtggtgcag
gtaaagcaagaacccatcgagagcgatgaggaggaagttgagccgcagcaggagctggag
tctgggcagaggcaggctgagcaggagctgcttttccgccagcaagccctcctgttggag
cagcagcgcattcaccagctgagaaactaccaggcatcgctggaggcagctggcatgccc
gtctcctttggaggccatcggcccctgtcccgtgcacagtcctcacccgcctcggctacc
ttccctatgtccgtacaggagccacccactaagccaaggttcactacaggccttgtctat
gacaccttgatgctgaaacatcagtgtacctgtggaaacacaaacagccacccggagcac
gcggggaggatccagagcatctggtcccggctgcaggagacaggtctccgtggcaagtgc
gagtgcattcgtggaagaaaagcaactctagaagagctgcagacagttcactcggaagct
catacgctgctgtatggcacaaaccctctgaacagacagaaactggacagcaagaaactt
ctaggttctctaacgtcgatgtttgtcaggcttccttgcggtggtgtcggggtcgacagt
gacacaatctggaatgaagttcactcatctggtgctgctcgtctggctgtgggctgcgtc
attgagcttgttttcaaagtggccacaggagaactgaagaacggatttgctgttgttcgg
cctccaggtcaccatgcagaagaaagcacacccatgggcttctgctattttaactctgtg
gcaattgcagccaagctgctccagcaaagactgaacgttagcaaaatcctcatagtggac
tgggatgtacaccacgggaacggtactcagcaagctttttacaacgatcctaatgttctt
tatatttcactacatcgctatgatgatgggaacttctttccaggcagtggtgctcctgat
gaggttggcacaggagcaggagttgggttcaatgttaacatggcctttactggtggcctt
gatccaccaatgggagacacagaatacttaactgctttcagaacggtcgtaatgcccatt
gccaatgagtttgccccagatgttgtgctggtgtcatctggttttgacgcagtggaaggc
catccaacgcctctgggaggatataacctgtctgcaaaatgctttgggtacctgacgaag
cagctgatgggcctggctggaggccgcgtcgtcctggcccttgaaggaggccacgacctg
actgccatttgcgatgcctcagaagcatgtgtttctgctttgctgggaaacgagcttgac
cctcttccagaaaaggttctccagcagagagcaaatgctaatgcagtgcattcaatggag
aaagtgattgagatacacagcaagtattggcattcactccagcgctacgcctcgaccgtg
ggctactccctgattgaagcacagaagtgtgagaatgaagaggccgagacagtgacagcc
atggcttctctgtcagtcggcgtgaagccagctgagaagcgacctgatgatgaacccatg
gaagaggaacctcccctgtag
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