Coturnix japonica (Japanese quail): 107316778
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Entry
107316778 CDS
T04297
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04145
Phagosome
cjo04148
Efferocytosis
cjo04510
Focal adhesion
cjo04512
ECM-receptor interaction
cjo04810
Regulation of actin cytoskeleton
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107316778 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107316778 (ITGB5)
04148 Efferocytosis
107316778 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107316778 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107316778 (ITGB5)
04810 Regulation of actin cytoskeleton
107316778 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107316778 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107316778 (ITGB5)
Membrane trafficking [BR:
cjo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107316778 (ITGB5)
Cell adhesion molecules [BR:
cjo04515
]
Integrins
Integrin beta subunits
107316778 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
107316778
NCBI-ProteinID:
XP_015724127
LinkDB
All DBs
Position
7:19125096..19164035
Genome browser
AA seq
812 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPLLRLLLRLLLLAAPLQPGRGLNLCTSGSASSCEECLLIHPKC
AWCSKEEFGSTKSVPSRCDFLQNLIANGCAGAIENPHSSSRVVKNVPLSSKGSGQSHLDV
TQITPQKVALNLRPGDRTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAE
EMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCIPSFGFRHLLSLTDK
VDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALD
GKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYVLYK
NFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLS
YPGLRKCGDLKIGDTVSFEVSVEARSCPTEDTSHVFTIKPAGFRDTLEVDVTYNCLCGCT
GRAEPASSKCSSNGTYACGLCECNAGYLGARCECEEGAGGETQAGLCREMEGKPICSGRG
ECSCNQCVCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCN
CSTETAGCVSSDGQMCSGRGNCICGRCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKL
FNSGRLDNQTCQKHCKDELITTVDVLKTDDPNAILCAYPVNNCVMKFTYSELASGKSNLT
VLKEPACSSAPSAITIVLAVIGSVVLIGTILLGLWKLLVTIHDRREFDRFQSERTRARYE
MASNPLYRKPISTHNVEFTFNKLNRSYNGTVD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccgctcctc
cgcctcctcctccgcctcctcctcctggccgccccgctgcagcccggcagaggtctcaac
ctgtgtacgagtggaagtgcatcatcctgcgaagagtgtctcctcatccatcccaaatgt
gcttggtgctccaaagaggagtttggcagcacaaagtctgtcccatcgcggtgcgacttc
ctgcagaacctcattgccaatggttgcgccggagccatcgagaacccacacagcagcagc
agagtggtcaagaacgtccccttaagcagcaagggctctgggcagagccacctggatgtc
acacagatcaccccacagaaggtcgccctgaatcttcgtcctggtgaccggacctccttc
cgagtgcaggtccgccaagtggaggactatcccgtggacctgtactacctgatggatctc
tccctgtccatgaatgatgacctggacaatattcgcaatctggggaccaagctggctgaa
gagatgcgaaagctcacgagcaatttccggctgggctttggctcttttgtggacaaaaac
atttctcctttttcctacacagcaccaagataccaaaacaatccctgcattggctataag
ctgttcccaagctgcatcccctcctttggtttccgccatctcttgtccctgacggacaaa
gtcgaccgttttaatgaagaagtgcagaagcagaaggtgtctcggaacagggatgcccca
gagggaggtttcgatgcaattttgcaggctgctgtgtgcaaggagaagatcggctggcgg
aaggaggcatcccacctgctggtcttcaccacagacgatgtgccccacatagctctggat
gggaagctgggggggctggtgcagccccatgatggccagtgccatctgaacgaggccaat
gagtacagcgcatccagccagctggattatccttccttagcactccttggggagaaactg
gctgaaaacaatatccacctgattttcgctgttacaaaaagccattatgtcctgtacaag
aacttcactgccttgattcctgggaccacagtggagattttgcataaggactccaagaat
atcattgagctgatcgtcaaggcttacaatagcattcggtccaaagtagaactcactgtc
tgggacagccccgaggacattggcttgaccttcactgccacctgccaggatggattgtcc
taccctgggctcagaaaatgtggggatctcaagataggagatacggtttcctttgaggta
tcggtggaagcccgcagctgcccaactgaggacacttcccatgtcttcaccatcaagcca
gccggcttccgtgacacactggaagtggatgtcacctacaactgcctctgtggctgcacc
ggccgtgcggagccagccagcagcaagtgcagcagcaatgggacctacgcctgcgggctg
tgcgagtgcaatgccggctacctgggggcccgctgcgagtgtgaggagggggccggcggg
gagacccaggccgggctgtgccgtgagatggagggaaagcccatctgcagcgggcggggg
gagtgcagctgcaaccagtgtgtctgctatgagagcgagtttgggaacatctacgggccc
ttctgcgagtgtgatgacttctcctgcgctcgatacaagggagtcctctgctcaggccat
ggagagtgtcactgtggggagtgcaagtgccacgcaggctacatcggggacaactgcaac
tgttccactgagaccgccggctgtgtctccagcgatgggcagatgtgcagcggccgcggc
aactgtatctgtgggaggtgccagtgcaccgagcccggggcgttcggggagacttgcgag
aagtgtcccacctgcccaggggtctgcagcaccaaaagggactgcattgaatgcaagctg
tttaactcaggaagactggataaccaaacctgccaaaagcactgcaaggatgagctcatc
accactgtggatgttctcaaaacggatgaccccaatgcgatcctgtgtgcctacccagtg
aacaactgcgtcatgaagttcacctactcggaactcgccagtgggaagtccaacctcact
gtccttaaagagccagcatgcagctcggcccccagtgccatcaccatagtgctggctgtc
attggcagcgtggtgctgattggcaccatcctgctggggctctggaagctgctcgtcacc
attcacgacaggagggagttcgatcgattccagagtgaacgcaccagggcaagatatgaa
atggcatccaatcctctctatcgaaagcccatttctacgcataatgtagagttcacattc
aacaagctcaacagatcttacaatggtacagttgactga
DBGET
integrated database retrieval system