Coturnix japonica (Japanese quail): 107316818
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Entry
107316818 CDS
T04297
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107316818 (DDX18)
03009 Ribosome biogenesis [BR:
cjo03009
]
107316818 (DDX18)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107316818 (DDX18)
Spliceosome [BR:
cjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107316818 (DDX18)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
90S particles
Helicases
107316818 (DDX18)
Pre-60S particles
107316818 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
107316818
NCBI-ProteinID:
XP_015724216
UniProt:
A0A8C2UIW7
LinkDB
All DBs
Position
7:18160520..18170025
Genome browser
AA seq
639 aa
AA seq
DB search
MSVSVAAGNLPMRLLRRKIHKRNLKLRQRNLKLRAAEQEGQASLAPPEEDEGVKEAAAPE
AEAETEASGQAAPGAETAETKRRKKKKRKAAAGPEEGSETKKAKAEEDVSVEAEDEDGQG
SGEKEAEEEDEVPSLPLGLTGAFEDNSFTSLAGLVSESTLKGISDMGFTHMTEIQHKSIK
PLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAMQTYGVL
KELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLV
IDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDN
KETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLP
VLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIH
RVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQAQLEKLIEK
NYFLHKSAQEAYKAYIRAYDSHSLKQIYNVGNLDLNKVSLSFGFRVPPYVDLNVNSNQGR
RLQKRGGGGGFGYQKPKSVHKAKIFKHISKKSDNRQFSR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcggtggccgcgggcaacctgcccatgcggctgctccgcaggaagatccac
aagaggaacctgaagctgcggcagcgcaacctgaagctgcgggctgccgagcaggaaggt
caggcttcgttggcccccccggaggaggacgagggggtgaaggaggcggcggccccagag
gcggaggcagagacagaagcgagcgggcaggcggcgccgggcgccgagaccgcggagacg
aagaggaggaagaagaagaagaggaaagctgctgctggccccgaggaaggttcagaaact
aagaaagcaaaagctgaagaagatgtatctgtggaggcagaagatgaagatgggcagggc
tcaggagagaaagaggcagaagaggaggatgaagtgcccagtttacctctgggtctaaca
ggtgcctttgaagacaattcttttacttcccttgctggtcttgtcagtgagagtacattg
aaaggtatcagtgatatgggctttacacacatgacagaaattcagcataaaagcattaaa
cctcttctggaaggcagggatattttagcagctgccaaaacaggcagtggcaaaacactt
gcatttctcattcctgcagtagagctcatctacaagttaaaattcatgcctagaaacggg
acgggtgttattattctttcacctactcgagagcttgccatgcaaacctatggagttctt
aaagaacttatgaatcatcacgttcacacctatggtctgatcatggggggcagtaacaga
tcagcagaagctcagaaacttggaaatggaatcaacatcattgtagcaacaccaggaagg
cttctggatcatatgcagaacactccaggtttcatgtacaagaacttacagtgtttggtg
attgacgaggcggatcgaatcttagaggttggatttgaggaagaaatgaaacagatcata
aaacttctaccaaagcgcagacagacgatgctgttttctgctacacaaaccaggaaggtg
gaagatctagccaagatttctctgaagaaagaaccactgtatgtaggagttgatgataac
aaggagacagcaacagtagatggccttgaacagggctacgtagtgtgtccatctgaaaaa
agattccttctgctcttcacgttcctgaagaaaaaccggaagaagaaactaatggtattt
ttttcttcatgtatgtcagtgaagtaccactatgaattactcaactacattgatttgcct
gttttggccattcacggcaagcagaaacaaacaaaacgtactacgacgttcttccagttc
tgtaatgcagaatctggaatcctattgtgcactgatgtagctgccaggggactagatatt
cctgaggtggactggattgtccagtacgaccctccagatgatccaaaagagtatatacac
cgtgttggtagaactgccagaggtataaatggtagaggacacgctctgctcattttacgt
ccggaagaactgggctttctccgttacctgaaacaagccagggtaccactcagtgagttt
gaattttcctggtcgaagatttcagatattcaggctcagctggagaaactgatcgaaaag
aactacttccttcacaaatcagcccaggaagcatacaaagcttacattagagcttatgac
tctcattctctgaagcagatctataacgtggggaacctggatcttaacaaagtcagcctc
tcctttggctttagagtccctccatacgttgacctcaatgtgaacagcaaccaaggcaga
agactacagaaaagaggtggaggtggaggatttggttaccagaaaccaaagagtgtccac
aaagctaaaatcttcaagcacattagcaagaaatcagacaatcggcagttttctcgttaa
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