KEGG   Coturnix japonica (Japanese quail): 107316940
Entry
107316940         CDS       T04297                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X2
  KO
K11138  telomere-associated protein RIF1
Organism
cjo  Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjo03032]
    107316940 (RIF1)
DNA replication proteins [BR:cjo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107316940 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 107316940
NCBI-ProteinID: XP_015724522
UniProt: A0A8C2UHQ3
LinkDB
Position
7:complement(30770853..30796245)
AA seq 2325 aa
MSGTMSGTGALRPLLETLQDPAAPVGDLTDAHLSLVNRLSGGDGKEFVAGVRKHFPRLSK
IFKAHICSENSELSNAALQALGFCVFNSKITSELSASEVEDLLSTLNSVALKTSDKNTRT
RALWVISKQTFPSEIIKKEVSSLISTLETILTKGDVQSMIVEYEALNVVIRLIEQAPAQM
GEEAVRWAKLIIPLVVHSAHKVQLRGATALEIGMPLLLQKQQEVAAVTEHLMTTKLIAEL
QKLFSTKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAW
KSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANF
EQVCIPLIQSTLSVDSSAALQGTPTRVPSTPNLANPPQKPGPYPFPSPATPRMNLNSSTA
GQVAIPSIQLLGIEMLLHFLMGPEVLDFAKRNKLVLSLEPLQQPLISSPSFFCKHASTFI
NAVQDGFIAIGKEVPESMLNNIWKDINGHVKAAIESGNKKEKQGSEVLTMLLQALKNIVR
SNSLPVQKILSLIDITVKELPPKVLGSPAYQIADMDLLNGTPALFLVQLPFHNNLLEWCV
TDERFFIILETLMRYVLSGPTSPLAFSESVLCVINQNAKQVENKEHLWRMWSIVVHPLTD
WINRTNEVNQGDALEHNFNAVYNALLLPVSHIFPVEEFPQPTMKSLLRAWSDLYRAFARC
AALVATAEENLCCDELCAKIISGLEGETPVMSAMLDGLTHVVAVMVDCINFAPYGIKYQP
KKRSPQTPTDWSKKKREPLGKLSSLFKLLVMLLDSFHALSSEESCPEPLVSVGHSVLAVL
HNIISHVSLPSVIGTMFAVLSKPLAVFYEKSKLADVPKPYSNLNSKLEKLLVEIILCLQS
HCTGCYDSELLEQLSPLLCVIFQHKSKQIRKQCANFWNATFAKAASLTYPEELKPVLSQA
KQKMPLLLPGFESIEIADEQSGPFSEEAENSQWDAKLSGMEVNLGQKRDSLLAQTSELKN
EIKDEPDNVPVTSAKLKLEFSASKPKSDVLLEEERSVDFVFIPPEPKARILTEHQKEVLR
SKRIGIPAMYNSLDSSQDTTLFSQYTQSQEDSLEKSSLIEKAKEDINNDPQGENEKSESC
IADSNGITGDCKPEDEEEKFADHLEMSSVLNSEGESQRDDGTGIIEEESSVGEGLEKSGT
ETASKESLAGNENTSALSSSSTSSDVISGTPQPVSRRQSFITLEKFDSSESRPFSPSALN
SASEMSRSAPTPDKQGDVNMRKTGHKAGKSGEENKKSSQAEQISAAKRRLTRRQSKMEQQ
GNQQSKLSAHSEEEKSARESFGSNSVENNPDSSCSVEDTERILTAQPQPVSSAEPEIKEA
EGVVAEIEKVRAFEVDSKENTPPKTAVPSEQVTGDGSQGTHSSLSQKILRRSSRRRSESA
EMAAGSQDKEDGYQKKDKRKEDERALQKKVPQTKEDAAQKQKVVCGKASEYARKKESGLS
ERSAAEEMGSKEPPAPKGAGEEANRSARKSEDALKSNTESQDCSSGTVGEKKRERPRYHT
RRSSQGLLSSIENAEADGSETKKENSKKRSGKAKHKNDSLEGKRRDVQPESQSQEVSPQV
DESKNLLGVNESELSSEVSTDVVPMSAPPDVESQMLLAGAGEAEGSASSEASPNTQSVNV
EESKAGMLAESVSDPHVSEGVLKGEENKCVEKQSSVEQHLDVQPENVQGANTSGSDLSSL
QMQHCQHKRSKRVRKAKSCNCCLKRVKQQTSLGESQNEDPRELVEPQTTPVQTAVSAAEV
SSSSNLEESLSIAPCAMSTPLPPAEESSLFSVEGEGTCDDNLQGNSGVVEEQAENPAHAA
GELGDLGVEIKVKEVDESDRAEQCVSVSECASGEPSDSSVAGGDQSEEKAAVEKGEESWH
GEMEEIPEVLADGSKPEAKQMDELEGNQDSMEEKAESAMEDVCVTPDNEMREEVLEAEIT
VPENEAVGNKDVVENKSADSPQKPEGLDSFSSVNESPSGVQARCTWSPSASPSTSILKRG
VKRHQEDDSLSPANKIRRVSFANPIYQEGLADDIDRKSPVIRSHSSPSSRSLKILSNIQT
KHVTTPTKGFLSPGSRNPKFKSSKKCLMTEMVKESLPAPTECVYPALVGCKAPVDVILPQ
ITSNICSRGLGQLIRAKNIKTVGDLSTLTASEIKTLPIRSPKVSNVKRALRGYHEQQVKS
RGCEEIGALEDVEKAVNSTEDKSPVDEEKLATDLGEPVALSSSSPPPADLLSQLDALAAQ
LTSEDLRSYPGSRLFEMQEKLASMTDCIMRTLRARWRSPPHDSAE
NT seq 6978 nt   +upstreamnt  +downstreamnt
atgagcggtaccatgagcggtaccggggctctgcggccgctgcttgagacgctgcaggat
cccgccgcgccggtgggggacctgacggacgcgcatctctctctggtcaaccgcctgtct
ggtggggatggcaaagagttcgttgcaggcgtcaggaaacactttcctcggcttagcaaa
atatttaaggctcacatttgtagtgaaaattcagaactcagtaatgcagcgttacaggcc
ttggggttctgtgtttttaattcaaagatcacctctgaattatccgcatctgaggtagaa
gatttgctttccacgttgaacagcgtcgccttgaagacttcagacaaaaacactcgcact
cgagcactttgggtgatctctaagcagacgtttccttcagaaattatcaaaaaggaggtg
tccagtcttatttctacgctggaaaccatacttactaaaggagatgtacagtctatgatc
gtggagtacgaagcactgaatgttgttatacgcttaatagagcaagctccagcccagatg
ggagaagaggctgtgaggtgggcaaagctgatcatccctctggtcgtccattcagctcac
aaagtgcagttacgaggtgccactgctctggagataggcatgccactgctgcttcagaaa
cagcaggaggtggcagctgtaactgagcacctgatgaccacgaaattgattgcagaactt
cagaaattgttttctacaaaaaatgagacgtacgtattaaagctgtggcctctgtttgtc
aagttacttgggaagactctgcatcgtagcggcagcttcatcaattctttgctgcagctg
gaagaacttggattccgtagcggctcacccgtggtcaagaaaatagctttcattgcatgg
aagagtctcatagataactttgctctaaatccagatattttgtgcagtgctaaaaggctg
aaattgctgatgcagcccctgagctcaatccacgtgaggacagaggctttggcactgaca
aagctggaggtctggtggtatctgctcatgaggctgggacctcagctgcctgctaacttc
gaacaggtctgcataccgttaatccagagcactctaagtgtggattcttctgctgcacta
caaggaactcccacacgtgtgccatccactcccaatttagcaaaccctccacagaaacca
ggtccttatccgtttccaagtccagccacaccaaggatgaacttgaattccagtactgca
ggacaggtggcaattccttccattcagcttctgggaattgaaatgctgcttcacttcttg
atgggaccagaagttttggattttgcaaagcgaaacaaactcgtgcttagtttagagcct
ctccagcagcccctgatcagcagcccatcctttttctgtaagcacgccagcacgtttata
aatgcagttcaggatggatttattgcaattggaaaagaagttcctgaatctatgctgaat
aatatctggaaggacataaatggacatgtgaaagcagctattgagtcaggcaataagaaa
gaaaagcaaggatccgaagtactgactatgttgctccaggccttaaaaaacatcgttaga
tcaaattcacttcctgtgcagaaaatactgtccctcattgatattactgtgaaggaatta
cctccgaaagtattgggatctccagcttatcagattgctgatatggatcttttaaatgga
actccagctttgttcttagttcagctgcctttccataacaacctcttggagtggtgtgtg
acagatgagagattcttcatcattctggaaactcttatgcgttatgttttatctggacct
acgtctccactggctttcagtgagtctgtgctgtgtgttattaatcagaacgccaagcag
gtggaaaacaaggagcatctttggaggatgtggagtattgttgttcacccactgactgac
tggattaaccggactaatgaagtaaaccaaggtgatgcgctggagcacaacttcaatgct
gtttacaatgctctgttgctaccagtgtcccatatcttccctgttgaggaatttccacag
ccaactatgaaatccttgctgcgtgcttggtcagacctgtacagagcatttgctcgctgt
gctgctttggttgcaacagcagaagaaaacctgtgctgtgatgaactgtgtgccaaaata
atatctgggctagaaggtgaaactccagtaatgtctgcaatgctggatggtctcacccac
gttgtggcagttatggtggactgcatcaactttgcaccctatggcattaaatatcagcca
aaaaaaagatctccacagacacctactgactggtctaagaagaaaagggagccccttggg
aagctctcttccctgttcaagctcctggtgatgttactggactccttccatgctctcagt
tctgaagaaagctgcccagaaccgctggtctctgttggtcattcagttcttgctgttctt
cacaacatcatcagccacgtttcgttgccttcagtgattgggaccatgtttgcagttttg
tcaaaaccgctggcagtgttttatgaaaaatccaagctcgctgatgtacctaaaccatac
agtaatctgaacagcaagcttgaaaaactcctggttgagattatcctgtgtttacagtcc
cactgcacgggctgctatgatagtgagctgctggagcagctttctccattgctctgtgtg
atatttcagcataagagcaaacagatacgcaagcagtgcgccaacttctggaacgcgaca
tttgctaaagctgcatccttgacttaccctgaagaattaaaacctgtgttaagtcaagcc
aaacagaaaatgccactcttgctgcctggttttgaaagcattgagatagctgatgaacaa
agcggcccattctctgaggaggcagaaaactcccaatgggatgcaaagctgagtgggatg
gaagtgaacttgggtcagaaacgagattctttattggcccagacaagcgaactaaaaaat
gaaataaaagatgagcctgataatgtgccagtcacatctgccaagttgaaattggagttt
tcagcttcaaagcctaaaagtgacgtacttctggaagaggagagatctgttgattttgtg
ttcattcccccagaaccaaaagcaaggatattgacagaacatcagaaagaagtgcttagg
tcaaagagaattggtattcctgctatgtacaacagtttagactcatcacaagatactacc
ttattttcccagtatactcagagccaagaagattctttggaaaagtcatctctaatagaa
aaagccaaagaagatatcaataacgatcctcagggagaaaatgaaaagagcgaaagctgt
attgctgattcaaatggaatcacgggggactgcaaaccggaggatgaggaagagaagttt
gctgatcacctagagatgagctcagttttaaacagtgaaggagagtcgcaaagggatgat
ggaactggaatcattgaagaggagtcatcggttggagagggattagaaaaaagtggtaca
gaaacggcttcgaaggaatccttagcagggaatgaaaacacttcagctctcagtagcagt
tctacttcaagcgatgtgatctctggaacaccacagcctgtcagccgacggcagtctttt
attacattggagaagtttgacagttcagagagccggcccttcagcccctcagcgttaaac
agtgcatcagagatgtctcgaagtgctcctacaccagataaacagggagatgtaaacatg
cgcaagactggtcataaggcaggaaagtctggggaagagaataaaaagtcttcacaagct
gagcagatttctgctgcaaaacgaaggctgacacgcaggcagagtaaaatggagcagcaa
ggaaatcaacagtccaagttgtcagctcactcagaagaggaaaaaagtgcacgagagtct
tttggttccaatagcgtggaaaataatcctgactcatcttgctcagtggaagacacggag
cgtattctcactgctcagccccagcctgtcagctctgcagaaccagaaatcaaagaagct
gagggtgtagtagcagaaatagaaaaggtccgggcgtttgaggtggattctaaagaaaat
acacccccgaagacggctgtgccctctgagcaggtaacgggtgatggcagtcagggcaca
cactcgtctcttagccagaaaatactgagacgttcttcgagacgacggtcagaaagtgca
gaaatggcagcaggcagtcaggataaggaagatggctaccaaaagaaagacaaacgtaaa
gaagatgaaagagctctgcaaaagaaggtgccccagactaaagaggatgcagcccagaag
cagaaagtggtttgtgggaaagcctcagaatatgcgaggaaaaaagaaagtggcctgtct
gagagaagtgctgcagaggagatgggctcaaaggagcctcctgctccaaagggagctggt
gaggaagcaaacagaagtgctaggaagtcagaagatgcattgaagagcaacacagaaagt
caggactgtagctcaggtacagtaggtgagaagaaaagggaacggccacgataccacacc
aggaggagctcacaaggattgctttccagcatagaaaacgcagaggctgatggctctgag
accaagaaggaaaattcaaagaaaagatctggaaaagcaaaacataaaaatgattctctt
gaaggtaaacggagggatgtgcagccagaaagccaaagccaggaggtgtctcctcaagta
gatgaaagtaagaatctgttgggggtgaatgaaagtgaactaagcagtgaagtcagcaca
gatgtggtgccaatgtctgcaccacctgatgtggaaagtcaaatgctgcttgcaggtgct
ggagaagctgaggggtctgcaagctcagaggcttcacccaacacacagagtgtgaatgtg
gaagaaagcaaagctggtatgttggcagaatctgtcagtgacccgcatgtgtctgaggga
gttttgaaaggagaggaaaataaatgtgttgaaaagcaaagttctgtggaacagcatttg
gatgttcagcctgagaacgtacaaggagcaaacacttcagggagtgacctctcctctttg
caaatgcagcactgccagcacaagagaagcaaaagggtgagaaaagcaaagagctgcaac
tgctgcttgaaaagggtgaagcagcaaacatcactcggcgagtcacaaaatgaggatcct
cgtgagctggtggagcctcagaccacaccagttcagacagctgtcagtgcagcagaggtg
tccagcagctcaaacctggaggagagcttgtccatcgcaccttgtgccatgagcacaccg
ctgcctcctgctgaggaatccagtctgttcagcgtggaaggggaaggaacgtgtgacgat
aatctgcagggaaattctggtgttgtggaggaacaggcagagaatccagcacatgcagca
ggtgaacttggtgatcttggagtggaaataaaagtgaaagaagttgatgagagcgacaga
gctgagcagtgtgtgtctgtgtctgagtgtgcttcgggtgagcccagtgacagctctgtg
gctggaggggatcagagtgaagaaaaggcagctgtagaaaagggagaagaaagctggcat
ggggaaatggaggagatccctgaggtgttggctgatggtagcaaacctgaggcaaagcag
atggatgagctagaaggcaatcaggacagcatggaggagaaagctgagagcgctatggag
gacgtttgtgttactccagataatgagatgagggaggaagtgctggaagctgaaattaca
gtgcctgagaacgaggctgtaggcaacaaagatgtagtagaaaataagagtgcggattca
cctcagaagccagaaggtctggattctttcagttcggttaatgagagccccagcggtgtg
caggcgcgctgcacgtggtctccttcagcttctccatccaccagcattttgaagagagga
gtaaaaaggcaccaagaggacgattccttgtcgcctgctaataagatccgtcgggtctct
tttgcaaaccccatttatcaagaaggactggctgatgacatagacaggaaaagtcctgtc
attagatcccattcttcaccatcttcacgaagtcttaaaatcttatctaatattcagacc
aagcatgttaccactccaaccaaaggatttctgtccccaggatctcgtaaccctaaattt
aagagctcaaagaagtgtttaatgacagaaatggtgaaggagtcactgcctgcccctacg
gaatgcgtgtatccagccttggttggctgtaaggcacccgttgatgtgattttacctcag
atcacatcaaatatatgttccagaggtctggggcagctcattcgagcgaagaacataaag
acggtgggagatctcagtactctgacagcatcagaaatcaaaactctccccatccgttct
cctaaggtttccaatgttaaaagagctctcagaggatatcacgagcaacaggtaaaatcc
cgagggtgtgaagaaatcggagcgctcgaagatgtggagaaagcagtgaacagcacagag
gataaatctcctgtggatgaggaaaaacttgcaacagatctgggtgagcccgttgccctg
agcagcagcagccctccccctgcagatctgctgagccagctggatgcgctcgctgctcag
ctcacctccgaagatctgcgcagctaccccggcagccgcctgtttgagatgcaggagaag
ctcgccagcatgacagactgcatcatgagaaccctgcgggcccgatggaggtcaccgccc
cacgacagcgctgagtag

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