Coturnix japonica (Japanese quail): 107317277
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Entry
107317277 CDS
T04297
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04115
p53 signaling pathway
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107317277 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107317277 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107317277 (COP1)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107317277 (COP1)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107317277 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107317277 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
107317277
NCBI-ProteinID:
XP_015725269
UniProt:
A0A8C2YHT0
LinkDB
All DBs
Position
8:complement(4843515..4963530)
Genome browser
AA seq
710 aa
AA seq
DB search
MSGSRPPPHPAAPPAAPASSSSSSSSSSSSSAAMAPGSSSSGGAAARPVLVAAAVSGSGA
AAGAGLARLAAAARPGGGSSGGGGAGGGGRKRPLLTPLCNGLLNSYEDKSNDFVCPICFD
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSE
EKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS
HSSIIDSTEYSQPPGFSGSSQAKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSD
DSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ
LKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagccgcccgccgccgcaccccgccgcgccgcccgccgccccggcctcctcc
tcctcctcctcctcctcttcttcctcctcctccgcggccatggcgcccggctcgtcctcc
tcgggcggagcggcggctcggcccgtgctggtggctgccgccgtgtcgggatcgggagcg
gcggcgggcgcggggctggcccggttggcggcggcggcgcggcccggtggcggctcgtcg
ggaggcggaggggcgggaggagggggcaggaagaggccgctgctcaccccgctctgcaac
gggctgctcaactcctacgaggacaagagcaacgactttgtgtgtcccatctgctttgat
atgattgaagaagcctacatgacaaagtgtggacacagcttctgctacaaatgtattcac
cagagcttggaggacaacaacagatgccccaaatgtaattatgttgtggacaacatagat
catctttatcctaacttcttagtcaatgaacttattcttaaacaaaaacaaagatctgag
gagaaaagattcaaactggaccattcagtgagtagcaccaatggccacaggtggcagata
attcaagatttgttgggaactgatcaagacaatcttgacttggctaacgtcaacctgatg
ctggagctgctggtgcaaaagaagaagcaattagaagcagagtcccatgctgcccagctg
cagatccttatggaattcctcaaagttgccagaagaaacaaacgagagcaactggagcag
atccagaaggagctaagtgttctggaagaagatattaaacgagtagaggaaatgagtggc
ttgtactccccagtcagtgaggacagtacggtgccgcagtttgaagctccctcaccttca
cacagtagtattattgactccacggagtacagccagcctccaggcttcagtggcagttct
caggccaaaaagcagccgtggtataacagcacgctcgcctcacgacggaagcggctcaca
gctcactttgaggacctggagcagtgctatttttccacaaggatgacacgtgtctcagat
gacagcagaaccacaagccagctggatgagtttcaggagtgtctatccaagttcacacgc
tacaattctgtccggcccctggcaacgctgtcctatgctagtgacctctacaatggctcc
agcatagtctccagtattgaatttgaccgggactgtgactactttgccatcgctggggtg
acgaagaagattaaagtctatgaatatggtacagtcattcaggatgcagtggatattcac
taccctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttac
cacaagaacctgctagccagcagtgactatgaaggcacagtcatcctgtgggatgggttc
acgggacaaagatccaaggtctaccaggagcatgaaaaaaggtgctggagtgttgacttc
aacttgatggacccaaagctattagcttcaggctctgatgatgcaaaagtgaagctgtgg
tctaccaatttggacaactccgtagcaagcattgaagccaaggcaaatgtgtgttgtgtc
aaattcagcccttcttctagataccacctagcctttggctgtgcagatcactgtgtccac
tattatgatcttcgcaacactaagcaacccatcatggtgttcaaagggcatcgcaaggca
gtctcctacgcaaaatttgtgagtggggaggaaatagtctctgcgtcaacagacagtcag
ctgaagctgtggaacgtagggaaacctcactgcttgcgctccttcaagggccacatcaat
gagaagaattttgtagggctggcgtccaacggagactacattgcctgtggaagcgaaaat
aattccctttacctatactataagggcctctcaaagacactcctgacattcaagtttgat
acggtcaagagcgtcctggacaaggaccggaaggaagatgacacaaatgaatttgtgagt
gctgtctgctggagggcactaccagatggggagtccaacgtgctaattgctgctaacagt
cagggtacaattaaggtactggagctggtatga
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integrated database retrieval system
