Coturnix japonica (Japanese quail): 107317713
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Entry
107317713 CDS
T04297
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04136
Autophagy - other
cjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107317713 (ATG4C)
04136 Autophagy - other
107317713 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107317713 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107317713 (ATG4C)
03029 Mitochondrial biogenesis [BR:
cjo03029
]
107317713 (ATG4C)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107317713 (ATG4C)
Membrane trafficking [BR:
cjo04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107317713 (ATG4C)
Mitochondrial biogenesis [BR:
cjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107317713 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
107317713
NCBI-ProteinID:
XP_015726185
UniProt:
A0A8C2TWT4
LinkDB
All DBs
Position
8:24812897..24833374
Genome browser
AA seq
459 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWNNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKSDESGELST
EGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPDALDIENSDSESWTAHTVKKLTASLEASLTAEREPRILSNHQER
TLRRNCGDSEMRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHI
LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGEADTKAVIILVPVRLGGE
RTNMDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK
GHSRDYDFASSPLHEEKYLFSEDEKKRLKRFSTEEFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacagggacagatgaagtggaaaagataaaatcaaagttcatgtcagcatgg
aacaacatgaaatacagttgggtattgaaaacaaaaacttacttcagtagaaactctcca
gtctttctgctgggaaaatgttaccacttcaaatctgatgaatctggtgaactctcaaca
gagggatccaacttcgataaaatcaacacagagatttcaggaaacgttgaggagttccgt
aaagatttcatttctaggatatggctgacttaccgagaggagtttcctcagatcaagggg
tctgcactaacaacagactgtggctggggctgcacgctcagaactggtcagatgttgctg
gctcaaggccttatgcttcatttccttggtagagcctgggtctggccagatgctttggac
attgaaaattcagattctgaatcctggacagcccacacagttaaaaagctgacagcatca
ttggaagcatcgcttacagcagaaagagagcccaggatcctgtcaaaccatcaggagaga
acactgaggaggaactgtggcgacagtgaaatgagaaatgaagtttatcacagaaaaata
atttcttggtttggcgactcccctctggcagcttttggcttacatcagctgatagaatat
ggaaagaagtctgggaaaatcgctggagattggtacgggcctgctgtcgtcgcacacatt
ttaagaaaagctgttgaagaagcgagagaccctgagctgcagggagtgacagtctatgtt
gctcaggattgtacagtctacagctcagatgttattgacagacagtgttcttttatggat
tctggagaagcagacacaaaagctgtaattatattggttccggtgagactcggtggagaa
agaacaaacatggactacttagagtttgtaaagggtattttgagccttgagtactgtgtt
ggtatcattggtggcaaacccaagcagtcgtattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaagatggatccg
agctgtacgataggattttactgtagaaccgtgcaggactttgagaaggcttcggaggaa
ataacgaagatgctgaaatcttcatccaaggagaaataccccttgtttacttttgtgaag
ggtcattcccgggactacgactttgcttccagtccactccatgaagaaaaataccttttc
tctgaggatgaaaagaaaagattaaagaggttcagtacggaggagtttgtcctgctgtga
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