Coturnix japonica (Japanese quail): 107317784
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Entry
107317784 CDS
T04297
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107317784 (MSH4)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107317784 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_23
AAA_30
AAA_28
Motif
Other DBs
NCBI-GeneID:
107317784
NCBI-ProteinID:
XP_015726332
UniProt:
A0A8C2TST1
LinkDB
All DBs
Position
8:26867822..26889411
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AA seq
929 aa
AA seq
DB search
MSNGSSRTEPGGRGGASAASGSYTGRCSSVSGPGGHYTLGLLQTPRSTSGSTGGLSSGGA
GLTPFRAAGSSSSKEPRSGRGESYLGDKSSCAENASAVNFTDGCSARGLNKTCVGKIPFS
ASRSIGRSHAPLTGYSVTSSSTASAHTAASVIVAVVEGRGLARGEVGMASIDLKNPEVIL
SQFADNTTYAKVITKLKILTPLEIIMSNTSCEAGNATKLFALITEHFKNVTFTTVQRKYF
NETKGLEYIEQLCASEFSTVFMEIQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVHFQG
SEKTAMIDSSSAQNLELVTNNRDSRNGHTLFGILNYTKTPGGSRRLRSNILEPLVDAETI
KTRLDCVQEFLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNIIYLK
HTLELVEPLKAALRSCNTSLLKAYYSALEDRRFGVILEKITTVINDDTRYAKGCLSMRTQ
KCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPLKTSFSSVRGFFIQMNADC
STLPNGQLPSEFTKVTKTRNTYNFTTADLIKMNERCQESLREIYHMTYLIVCKLLNEIYE
HIHCLYKLSDIVSMLDMLLSFAHACTISDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSN
NVYLTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGM
DDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLHLK
AFTLFATHFLELCHMDALYPNVENYHFEVQHVRSSSGKKEKIMYTYTLSKGYTEEKNYGL
KAAEVSSLPPSIISDAKAITNHVAKQILHRQKTTPEMMKHRAVYQLAMRLVQTARNSRLD
SDSLQIYLKGLKKKYTASCAAPDWSEEQR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcagcagcaggacggaaccgggcgggagagggggcgcctcggccgcctca
gggtcctacacgggccgctgctcctccgtgtcggggccgggcgggcactacacgctgggc
ctgctgcagacgccgcgcagcacctcgggcagcaccggcggcctttccagcggcggggcg
gggctcactccgttccgtgctgccggcagcagcagcagcaaggagccgcgctccgggcgg
ggagaatcatatcttggggacaaaagttcttgtgcagaaaatgctagtgcagtgaatttc
acagatggttgttctgcacgaggcctgaataagacatgtgtaggaaaaatacccttttct
gctagtaggtctattggcagaagccatgcccctcttacaggatattcagttacgtcatca
tctacagcctctgctcatactgctgcatcagttattgtagctgtagtagaaggaagaggc
ctcgccagaggtgaagtaggaatggccagtattgacttaaagaatcctgaggtgatacta
tcacaatttgcagacaatacgacttatgctaaggttattactaaactcaagattttaact
cctctggaaataataatgtcaaacacctcttgtgaagcagggaatgcaacaaaattgttt
gctttaataacagaacatttcaaaaatgtgacgtttacaaccgtacaaagaaaatacttc
aatgaaacaaagggtttggaatatatagagcaattgtgtgcatctgaattcagcaccgtt
ttcatggagattcaatcaaagtactactgtcttgcagctgctgcagctttgctaaaatat
gttgagtttattcagaactccgtttatgctcctaagtcactcaaggtccatttccagggg
agtgaaaaaacagctatgatagattcatcatcagcccaaaatctggaactggtaactaat
aacagagattctcggaacggtcacacactttttggtatcctaaattacactaaaactcca
ggtggaagtcgaagactcagatccaatattctggagccacttgttgatgctgaaacaatt
aaaacaagactggactgtgttcaggaatttctccaggatgaggagctgttttttggtctt
caagcagttatctccaaattcctggatacagaacaactactttcagttttggtacaaatt
cctaagcaagatacagttaaaactgctgaatcaaaaataactaatataatctatctgaag
catactctggaacttgtggagcctctgaaagctgctttaagaagctgtaacacatcactg
ctaaaggcctattacagtgctcttgaagatagaaggtttggagttatacttgaaaagatt
acaactgtgattaatgatgatacgagatatgccaaaggatgtctgagtatgagaacccaa
aaatgctatgctgttaagccaaacatcaatgaattccttgacatagctcgtagaacatac
acagaaattgttgatgacatagcaggtatgataacacaacttgccgagaagtacaaccta
ccactgaaaacaagtttcagttctgtgcgtggattttttatccagatgaatgctgattgt
tcaacattacccaacggccaacttccttcagaatttacaaaggtcactaaaacgaggaac
acatataacttcactacagcagatctaataaaaatgaatgaaagatgccaggaatccctg
agagaaatatatcatatgacctacttaatagtgtgtaaactgctgaatgagatctatgaa
catattcattgtctatacaagctatctgacattgtgtcgatgctggacatgctgctttca
tttgctcatgcctgcaccatttctgactatgttcgtccagaatttacagatactttagcg
atcaaacagggatggcaccctattcttgaaaagatagctatggaaaaacccgtgtctaac
aatgtgtatctgacagaaggcagcaattttctcattatcacaggaccaaatatgagtgga
aaatcaacatatctaaaacagattgcactctgtcaaattatggcgcagattggttcttat
gtcccagcagaatattgctcttttcgaattgcagagcagatttttaccagaataggtatg
gacgatgatatagaaacaaatgcctcaacattcatgaaggaaatgaaagagataacatac
atcatacaaaatgcaaatgacaaatcactcatcataattgatgaacttggcagaggtacc
agtgctgaagaaggtattggcatttgttatgctgcctgcgaatatctcttgcatttgaag
gcgtttactttgtttgctacacatttcctggaactgtgtcatatggatgctttgtatccc
aatgtggaaaactaccattttgaagtgcagcatgtgagaagcagcagtggaaagaaggag
aaaattatgtacacttacacactttctaaagggtatacagaggaaaaaaactatggatta
aaagctgcggaagtttcctctctaccaccatccataatttcggatgcgaaggcaatcacg
aaccatgttgcgaaacaaatcttgcacagacagaaaaccactcctgagatgatgaagcac
agagctgtgtaccagctggcaatgaggctggttcagactgcgaggaattcgcgactggat
tcagacagtctgcaaatatatttgaaaggcctgaagaaaaagtacacggccagttgtgct
gcacctgattggagcgaggagcagcgttaa
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