Coturnix japonica (Japanese quail): 107317846
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Entry
107317846 CDS
T04297
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107317846 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107317846 (VPS8)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107317846 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
107317846
NCBI-ProteinID:
XP_015726454
LinkDB
All DBs
Position
9:2469238..2527284
Genome browser
AA seq
1399 aa
AA seq
DB search
MDAAPEDGPAGNEAEPDGPPCTEPAAPRLSAAELDRELESRSELIDDKEFDIPQVDTPPT
LESILNETDDEEESFVLEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLS
LHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLC
LGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILH
IKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRD
HPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPML
AFCRGDVVHFLLVKRDDTGAIHVTKQKQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDR
QTQEELETIEIPEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGT
KSVHVMTLRSWRERIDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTNKRKAVIADRM
VEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMSENS
VAKGIFLECLEPYILGDKLVGITAQVMKDLLLHFQDKNRLENMEACIVHMDITSLDIQQV
VLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYI
SCCLAGRAYPLGDIPEDLVPLVKNQIFEFLIRLHSTEGSVDEEVYPHIRTLLHFDTREFL
NVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTL
FVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQIC
EFMYERELRYDKIIDCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALEHIEELL
LLSPCKAADLVAIHFTEQIESIIANLQDQFLLFQFLRSLLDPREGINQDLLHLPPHITEQ
FIELLCQHSPDHVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLE
RLQSKLLMLTQDDGGSAELPLLESIEDTLMKTIALCQRNSHNLNQQQREALWFPLLEAMM
SPQKLSGSSQYRYAESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVL
GMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQESA
DEIIVFSCGHLYHSLCLLSKECGAVSKDAMQWMCYKCNSSNKGGKLSENFSELKKGSGTS
LAQTGSESALDPQQIQAFDQLCRLNRGTSRLALLTELSRAHSGEKHGLLSVSHGDSAASS
VFQNETFQLHLAPPPLMDD
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggctccggaggacggtcccgcggggaatgaggctgagccggacgggccgccc
tgcacggaaccggccgcgccccgcctgagcgcggcggagctggaccgcgagctggagtcc
cgcagcgagctgatcgatgacaaagagttcgacatccctcaagtcgataccccaccgacg
ctggagagcatcctgaacgagactgatgatgaagaagagtctttcgttttggaagatccc
tttctcttgaacatcgataacacggacacacactcctacgacacatcttctgtagccagc
tctgacagcggggacaggacgcacctgaaaaggaagaaaaaactcccggattctctctct
ctgcatggatcagttataagactctcgcttctgaaagggatttctgcccaaatagtgtct
gcagcagacaaagtggatgctggtttgcctactgcgattgcagcatcgaatctgatcgca
gtggggacttctcatgggctagcactgatttttgatcaaaaccaggctctgaggctgtgt
ctgggcagcactgctgttggggcccagtacggggctatctctgctctcagcatcaacaat
gactgctccaggctcctgtgtggctttgcaaaaggacagatcaccatgtgggatctggcc
agtgggaagctgctccgatcaataacagatgctcaccccccaggaacagccattttgcac
attaagtttacagatgacccgacactcgcaatttgcaatgacagcggaggctccgtattt
gaactctcattcaagagggttatgggagtgagaacgtgtgaatctcgatgcctcttcagt
ggctccaagggggaggtgtgttgtattgaaccattacatgcaaaggttgaactaagagac
caccctatcacccagtattcactgctggccatggcctccctaacaaagatactggttatt
ggcctgaagccatctttgaaagtgtggatgacctttccctatggtcgtatggacccttcg
agtgtcccccttctggcatggcactttgtggctgtgcagaactcggtgaaccccatgctt
gcgttttgtagaggcgatgttgttcattttcttctggtaaagagggatgatactggtgca
atacatgtcactaagcaaaagcagctccatcttcactatgacctcatcaacttcacttgg
ataaactcccgtacagcagtgcttctggacagcgtggagaagctgcatgtcatagatcgt
cagacacaggaggagctggagaccatagagattccagaagttcagctggtctacaacagc
agccacttcaagtccctggctacgggaggcaacgttagtgaggcgctggcattggttgga
gagaaagcttgttatcagtccatcagcagctgtggtggccagatcttttacctgggaact
aagtcagttcatgtcatgacattgaggagctggagagagagaattgatcaccttctgaaa
caggagcgtctcaccgatgccctggctctcgcttggtccttttatgaagggaaagcaaag
gctgtagtaggcttgtctggggacacaaacaagaggaaagcagtcattgcagacagaatg
gttgagatccttctccattatgctgatcggactttgaagaaatgccctgaccaaggaaaa
atccaggttatggagcaacactttcaggatgtggtgcctgtcatagttgattactgcctc
ctgctccagcgcacggatctgttgtttaaccagatctatgataagatgagtgagaattct
gtagccaagggaatcttcctggagtgcttggagccctatatcttaggtgataagctggtg
ggaatcacagctcaagtgatgaaagacttgctccttcacttccaagacaagaacaggctg
gaaaatatggaagcctgcattgtgcatatggatatcaccagcctggacatacagcaggtg
gtccttctgtgctgggaaaaccatctctatgatgccatgatctatgtctacaacagtggg
atgaatgacttcatcagtcctatggagaagctgttcaaagtcattgctcctccactgaat
gctgggaagtctctcacagatgagcaggtggtaatgggcaacaagctgctcgtgtatata
agctgctgcttggcaggccgtgcgtatccattgggtgatattcctgaagatctggtacct
ctggttaaaaatcagatctttgagtttctcatccggttgcattcaacagagggatctgtg
gatgaggaggtctaccctcacattcgtaccttgctgcactttgacactcgggaattcctt
aatgttcttgctttgacttttgaagactttaagaatgacaagcaggctgtggaatatcaa
cagcgcattgtggacatccttctgaaagtcatggtagagaattctgacttcaccccatcg
caggttggctgtctctttactttccttgcccgtcagctggccaagcccaacaacacactg
tttgtgaacagaacgctttttgatcaggtccttgaatttctgtgcagtccagatgatgac
tcccggcattcagagaggcagcaggtgctgttagaactgctgcaggcaggagggatagtg
cagtttgaagagagccgtcttatccaaatggcagaaaaagctgaattctatcagatttgt
gagttcatgtatgaacgagagcttcgctatgacaaaatcattgactgttacctgcgtgat
ccagtgagaaaggaagaagttttcaactacattcacaacatcctgtccatgcctggctac
agcgctgaagaaaagcagtcagtgtggcagaaagctttggaacatatagaggaattattg
ctactcagcccatgtaaagcagctgacttggtggccatccacttcacggagcagattgag
agcatcattgcaaaccttcaggatcagttcttactcttccagtttctgaggagtctgctt
gacccgagagaaggcatcaaccaagacctgctgcacctaccaccccacatcacagagcag
ttcatcgagctgctgtgtcagcacagccctgaccatgttctggagacactgaaagtcctg
gagtactgcaggctggaggaaaccatccagataacccagaaacatcagcttcatgaagct
tcctcttatttactggagaagaagggagatatccacggtgcctttctggttatgctcgag
cgattgcagagcaagttgctgatgcttacacaagatgatggaggttcagcagaactcccc
ttgctcgaaagcattgaagataccctaatgaaaacaattgccctttgccagaggaattca
cacaacttaaaccagcaacagcgagaggccctctggtttcccctgctggaggctatgatg
tccccacagaaattgtctggctcttcacagtaccgatatgctgaatccttgaagagtttg
acgatgcaagtgctgaacaacatggctgcatttattgcccttccttcaatcctgcagaga
atcctacaggatccagtttatggaaaagggaaacttggagaaattcaaggtctcgtcttg
ggaatgctggacacttttaactatgaacaaacccttttagagacgaccacgaaccttcta
aaccatgatctccactggtccctgtgtaacctaagagcttctgtcactagagggcttacc
ccaaagcaggattactgctgcatttgtctacagcagtataaaaggaggcaagaaagcgct
gatgaaatcatcgttttcagctgcggccacttataccattccctgtgcctgctgagtaag
gagtgcggggcagtaagcaaagatgcgatgcagtggatgtgctataaatgcaactcgagc
aacaagggaggaaaactgagtgagaacttctcagagctgaaaaaaggaagtggaacgtcc
ttggcacagacagggtcagagtctgcattggaccctcagcaaatccaggcctttgaccaa
ctctgccgactcaaccgtgggacctcccggttagctctcctgactgaactgtcccgtgcc
cacagtggggaaaagcacgggctgctcagtgtttcccatggggattctgctgccagcagc
gtcttccagaatgagaccttccagctgcacctggcccctccaccactgatggatgactag
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integrated database retrieval system
