Coturnix japonica (Japanese quail): 107318062
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Entry
107318062 CDS
T04297
Symbol
TRIP12
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107318062 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107318062 (TRIP12)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107318062 (TRIP12)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
HECT type E3
107318062 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
107318062
NCBI-ProteinID:
XP_032302346
LinkDB
All DBs
Position
9:complement(8482601..8524992)
Genome browser
AA seq
2060 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDTAGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHCSKRGCSSSAVLIPQEDSERVSTSEKQKTGQVPKKDNSRGVKRSASPDY
SRTNSPSSAKKPKALQHAETSSESNKPHTKSKRRHLDQEQQKSTQLPSTSKAHTRKGGAA
GSSRSQKRKRTESTSCIKSRSAAESTGAEEKSAKSSKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKED
PELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHI
ASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVC
TNGSGTLGTTTTISTGTATAATNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPART
AGVSGLARAASKDTISNNREKIKGWIKEQAHKFVDRYFSSENMDGSNPALNVLQRLCTAT
EQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYXTSKSEKDAVSRDIRLK
RFLHVFFSSPLPGEEPLGRLEPLENAPLLALVRKMNSCLSLMEQFPVKVHDFPSGNGTGS
RGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVRE
DDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLLYNMTVYQAVKLYSLQAEE
ERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKASPRNSK
KHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNA
ICKEIIPTSEFINSKLTAKANRQSQDPLVIMTGNIPTWLTELGKTCPFFFPFDTLQMLFY
VTAFDGDXATQRLLDTNPEINQSDSQDSIVAPWLDRKKRTVNRDELLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHN
LQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETS
LTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGL
DFTLPGFPNTELKKRGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLS
HLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIE
IMREKLLIAAREGQQSFHLS
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacacagcaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacactgttctaaaagaggctgtagttcatct
gctgttttaataccacaagaagattcagaaagagtcagtacttcagaaaagcaaaaaacg
gggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagattac
agcaggaccaattctcctagctctgctaaaaaacctaaagcacttcaacacgccgaaacc
tcctcagaaagtaacaagccacatactaaatccaagagaagacacttagaccaagaacag
cagaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgct
ggtagctcccgaagtcagaaaaggaaaaggacagagagtacgtcttgtataaagagtcgt
tcagcagctgaatcaactggcgctgaagagaagtcagcaaaatcctccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttcagct
tctacatcctcttcctcttctgctgttgcctctgcttcttctactgttcctcagggtgcc
agagtgaaacagggtaaggaccagaataaggctagacgttcacgttctgcgtccagccct
agtccaagaaggagcagcagggacaaagaacagagcaaaacaggtggctcttcgaagttt
gactgggctgctcgattcagtccaaaagttagtctccctaaaacaaaactgtctctacca
ggctcttctaagtcagagacctcaaaacctggaccttcaggactacaggctaagctagca
agcctaagaaaatccacaaagaagcgcagtgaatcaccacctgctgagctccccagtttg
cggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaagagaagatggctgatcctgac
aacaaccaggatggagttaactcttcagctgcacgtacagatgaggctccccagggagct
gcagcttctagctctgttgctggggctgtaggtatgacaacatccggagaaagtgagtca
gatgactctgagatgggaagactacaagctctgttagaggctaggggtcttcctcctcac
ctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtgga
gctagttctaaagcccagcagcttttacaaggtctccaagccactgatgaaagtcagcaa
ctacaggcagttattgagatgtgccagctgttggtcatgggaaatgaagaaacactggga
ggatttccagtcaagagtgttgtgccagctttgataacattgctgcagatggagcacaac
tttgacatcatgaaccatgcttgtcgagccttaacatacatgatggaagcacttcccaga
tcatctgctgtagtggtagatgcaattcctgtcttcttggagaagctgcaagttattcag
tgcattgatgtggcagagcaggcattgacagctctagagatgctatcacgcaggcatagt
aaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggagttcttcagt
ataaatgcgcagaggaatgcactagctattgctgccaattgctgtcagagtataacacct
gatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccatcag
gacaagaagtctgttgaaagcacttgtctctgttttgcacggctggtagacaatttccag
catgaggagaacttgcttcagcaggttgcttcgaaggacttgttaacaaacatccagcag
ctcttggtagtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatg
ttttccttaatgtgttccaattgtccaacgcttgcagtccaacttatgaagcaaaacatt
gcagaaacacttcactttctcctttgtggagcatcaaatgggagttgtcaagagcaaatt
gaccttgttccacgaagtcctcaagaactctatgagcttacttctcttatctgtgaactg
atgccttgtctgccaaaagaggggatatttgctgttgatactatgctaaagaaaggaaat
gcacaaaatacagatggtgcgatatggcaatggcgagatgacaggggtctctggcatccc
tataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgagata
agcctgtcgacacttggacgtgtctatactattgattttaactctatgcagcaaataaat
gaggatactggaacagcacgtgccattcagcggaaaccaaaccctttagccaatacaaac
actagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagaagac
ccagaattggctaagtcctttatcaaaacactgtttggtgttctttatgaagtgtatagt
tcttcagctggacctgctgttagacacaagtgccttagagcaatacttagaataatttat
tttgctgatgctgaactcctgaaggatgtgctgaaaaaccatgctgtgtcaagtcatatt
gcctccatgctgtcaagtcaagaccttaagatagtagttggagccctgcagatggcagaa
atcttaatgcaaaagctacctgacatttttagtgtttacttcagaagagaaggagtgatg
catcaagtgaaaaacttagcagagtctgaggctttgttaacgagcccaccaaaagtatgc
actaatggatcaggaacgctgggtaccactacaacgataagtactggaacagccactgct
gccactaatgcagctgcagatttgggctctcccagcttacagcacagccgggaggattct
ttggatctaagcccacagggacgactgagtgatgttctgaagagaaaaagactgccaaaa
cgagggccaaggagaccaaaatattctcccccgagagatgatgacaaagtagacaatcaa
gcaaaaagccctacaactactcagtctcctaaatcttccttcttagcaagtttaaatcct
aaaacatggggaagattaagtacacagtctaacagtaataacattgagccagcgcgaaca
gcaggtgtaagtggtcttgcaagagctgcttccaaggatacaatttccaataacagagaa
aaaattaagggttggattaaggagcaagcccataaatttgtagaccgttattttagttcg
gaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgcaact
gaacaacttaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcatt
gtctcagagtctgacgtctcctcatttgaaatccagcatagtggatttgtgaaacaattg
ctgctttattagacatctaaaagtgagaaagatgctgtaagcagagatatcagattgaaa
agatttcttcatgtatttttctcctctccacttcctggagaagaaccccttggaagatta
gagccattagaaaatgcacctttgttggcattagtccgtaaaatgaacagttgcctcagt
ctgatggagcagtttccagtaaaagtgcatgacttccccagtggaaatggaacagggagc
agaggatctcaagctttaaagttcttcaatacgcatcagttaaaatgccagctgcaaaga
catccagactgtgctaatgtgaagcaatggaagggtggacctgtgaagattgatcctctg
gctttggtccaagctattgaaagatatcttgttgttagagggtatggaagagttcgagaa
gatgatgaggatagtgatgatgatggatcagatgaagaaatagatgaatctttggctgct
caattcttaaattcagggaatgtgagacatagattgcagttttacattggggatcacttg
ctactgtataatatgactgtgtaccaagcagttaagctgtacagtttgcaagctgaggag
gagagggaatcgactgatgatgaaagcaacccattaggaagagctgggatttggacaaaa
acacataccatttggtacaaacctgtacgggaggatgaagatggtaacaaagactgtgtt
ggtggtaaaagaggaagagctcaaactgctcccacaaaagcctcacctagaaattctaaa
aagcatgatgaattgtggcatgatggtgtgtgcccttcagtattgaatcctttggaagtt
tacctcatatctactcctcctgaaaacataacatttgaagatccttcattagatgttatt
cttcttttgagagttttacatgctatcagtcgatactggtattatttatatgataatgca
atatgcaaggagattattccaacttcagaatttatcaacagtaaactgacagcaaaagca
aacagacagagtcaagatccactggtgattatgacaggaaacataccaacctggctgaca
gaacttggaaaaacatgcccatttttctttccatttgataccctacaaatgctgttttat
gtaactgcttttgatggtgattgagccacacaaagactactggatactaatccagaaatc
aatcaatcagattctcaggatagcatagtggcaccatggctggacaggaaaaaacgcact
gtgaacagagatgagctgttgaaacaggcagaatctgtgatgcaggatctaggcagttca
agagccatgttggaaatccagtatgagaatgaagttggcacaggcctgggccctacacta
gagttctatgcacttgtatctcaggaactacagagagcagacttaggcctttggagggga
gaagaagtaactttagccaatccaaaaggaagccaagaaggtaccaagtatattcataat
ctccaaggcctttttgcactcccttttggtagaacagccaagcctgctcacattgcaaaa
gttaaaatgaagttccgctttctgggaaaactaatggctaaggcaatcatggattttaga
ctggtggaccttcctcttggacttcctttttataaatggatgttacgccaggaaacttct
ttgacatcacatgacttgttcagtattgatccagtagtagccaaatcaatatatcacctt
gaagatattgtaagacaaaagaaaagacttgagcaggacaaaacacagaccaaagaaagt
ctacagtatgcattggaagctctgactatgaatggctgctcagtggaggatctagggctg
gatttcacactccctggatttcctaatacagagctgaaaaaaaggggaaaagatacacca
gtcaccatccacaatttagaggagtacctcagattggttatattctgggcactgaatgaa
ggtgttgccagacagtttgattccttcagagacgggtttgaatcagtcttccccctcagt
catcttcagtacttctatcctgaggagttggagcaactcttatgtggcagcaaaacagac
acatgggatgccaagaccttaatggaatgttgcaggccagatcacggttatacacatgac
agtcgtgcagtgaagtatctctttgaaattctcagtagctttgatagtgagcagcagaga
ctgtttcttcagtttgtgactggtagtcccaggctgccagtaggaggctttcgaagtttg
aatcctccactgacaattgtacggaagacatttgagtctacagagaatccagatgacttc
ttaccctcagtaatgacctgtgtgaactatctcaaattaccggactattcaactattgag
ataatgcgtgaaaaactcttgatagctgcaagagaagggcagcagtcattccatctttcc
tga
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