Coturnix japonica (Japanese quail): 107318220
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Entry
107318220 CDS
T04297
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107318220 (SOX2)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107318220 (SOX2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107318220
NCBI-ProteinID:
XP_015727290
UniProt:
A0A8C2TUY3
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Position
9:complement(14829616..14832179)
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AA seq
404 aa
AA seq
DB search
MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPSTQMYVRQRGRGGGVGVGGEGELNKTNKQQQQQKTFIRNSGLFVLFCFV
FVGFCFLVVFFWTIFVQRKLWGGRGGGGGGAGRGSEIKPTKELV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaaacctcccgccccccagcaaacttcgggggga
ggcacaggcaactccaactcggccgcgaacaaccagaagaacagcccggaccgcgtcaag
cgccccatgaacgccttcatggtgtggtcgagggggcagcggcggaagatggcccaggag
aaccccaagatgcacaactcggagatcagcaaacggctcggggccgagtggaagctgctg
tccgaggcggagaagcggcccttcatcgacgaggccaagcggctgcgggccctgcacatg
aaggagcacccggattataaataccggccccggcggaaaaccaagaccctgatgaagaag
gataagtacacgttgccagggggcttactggcgccgggcaccaataccatgacgaccggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttacgcgcac
atgaacggctggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacgtacatgaacggatcgcctacc
tacagcatgtcgtactcccagcaagggaccccgggcatggccctgggctccatgggctcg
gtggtcaagacggaatccagctccagtccccccgtagtcacctcctcgtctcattcgagg
gctccttgccaagccggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacactcccttctactcaaatgtatgtaagacaaagg
ggccgggggggcggggtgggggtggggggggaaggagaactaaacaaaacaaacaaacaa
caacaacaacaaaaaacttttattagaaattctggactttttgttttgttttgttttgtt
tttgttggtttttgttttttggtggtttttttttggactatttttgtacagagaaaactc
tgggggggaaggggagggggtggggggggggcagggagggggtcagaaataaagccgaca
aaggaacttgtatag
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