Coturnix japonica (Japanese quail): 107318839
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Entry
107318839 CDS
T04297
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107318839 (CHD2)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107318839 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
Myb_DNA-binding
DTHCT
CHDCT2
Motif
Other DBs
NCBI-GeneID:
107318839
NCBI-ProteinID:
XP_015728590
LinkDB
All DBs
Position
10:13066172..13166631
Genome browser
AA seq
1909 aa
AA seq
DB search
MCPLGAWMERVPTPPLCSQLGLPWGWNATAPCGRITWFCQRRRTWVQVWTNQVLASSYPK
TGVMLLAPFSTKLSMVSLRCSGDLVYAGSSESHSASEEASGSDSASQSESEQGSEQGSES
NSSSESSESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSN
RSRQEPSRFNIKDEASSESENESPKRRGQKQVKRKKKWKREISGEEEDEDGGDQGTSAES
EPEPKRIKAKRPVQRRAMAKTSVKKPPKLQRGKKRKRQVSSEDDDDDEDGETPKRQTRRR
AAKNVSYKEDDDFETDSDDLIEMTGEGADEHEDNSETIEKVLDIRLGKKGATGASTTVYA
TEANGNPSADFDPEKDEGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKE
EEIKQWLAKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKTATGHADFPANSRKT
SSNDPEYLCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPR
FVALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYL
FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKR
LKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG
TPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVE
KSLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCY
LIKPPEENERENGTETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEY
LTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD
SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT
GRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRE
NEVSTSATDELLSQFKVANFATMEEEETELDERPQKDWDDIIPEEQRKKVEEEERQKELE
EIYMLPRIRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRK
DTVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAM
QEYEEQLKENPGETGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERK
KYRLTCRVKAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKK
PQGKQLQTRVDYLLKLLKKDLEKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELS
PPRHSDNQSEEGEVKDDGLDKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKRTKEKK
EKPKGGEAKSGSKGKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALK
QLDKPDKGLTVQEQLEHTRNCLLKIGDRISECLKAYTDQDLIKLWRRNLWIFVSKFTEFD
ARKLHKLYKMAHKKRSQEEEEQKKKEDMASMPSMKKPFRPEPSGSSRDPTMSQSHVPHNP
HSQKLHMPPSHAQQQMHGHPRESYGHPPKRHFSNTDRGEWQRDRKFSYSGNSNQMWGGER
HHQYEQHWYKDHHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYSSDRDHRGHRDYYDRH
HHDSKRRRSDEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKPGDYKQPLPP
PHPSVSDPRSPPSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNMRKT
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccactgggtgcatggatggaacgtgtcccaacccctccgctttgttcccagctg
gggttgccatggggctggaatgcaactgccccttgtggcaggatcacttggttctgccag
aggaggaggacatgggttcaggtgtggacaaaccaagtgctggcttcatcctaccccaaa
accggagtcatgctgctggcccctttctccactaagctaagcatggtgtccttgcgctgt
tctggtgacctagtttatgctggctcgagtgaaagtcactcggcatccgaagaagcctct
ggctctgactctgcaagccagtctgagagtgagcagggcagcgagcagggcagcgagtct
aacagcagctccgagtcctctgaaagtcagtctgaatccgaaagtgaatcaacgggttcg
aaatcccagcagacccctcctgaaaccaaagaaaaaccagcctctaagaaggaaaggata
gcagatgttaaaaagatgtgggaagaatatcctgatgtttatggggttaggaggtcaaac
cgaagcagacaagaaccgtcacgatttaatataaaagatgaggcaagtagcgaatctgaa
aatgagagcccaaaaagaagaggccagaagcaagtgaaaagaaaaaaaaagtggaaaaga
gagatttctggtgaagaagaggatgaagatggaggggatcaagggaccagtgcagagagt
gagcctgaaccgaagagaattaaagcaaaaagacccgtccaaaggagagcaatggccaaa
accagtgttaaaaaacctcccaaactccagcgtgggaagaagagaaagagacaggtgtca
tctgaagatgacgacgatgatgaagatggtgaaactcccaagagacaaactcgacgaaga
gcagccaaaaatgtcagttacaaggaggacgacgattttgagaccgattctgatgacctg
atagagatgactggggaaggggctgatgaacacgaagacaacagtgaaactattgaaaaa
gtcttggacatcaggcttggaaaaaaaggagccactggcgcttccaccacagtgtatgca
actgaagccaatggcaaccccagcgctgactttgaccctgaaaaagatgagggagaggtt
cattacctgatcaaatggaaaggctggtcgtacatccacagcacgtgggagagtgaggag
tccctgcaacagcagaaagtgaagggcctgaaaaaactagaaaacttcaagaaaaaggag
gaggagatcaagcaatggctggccaaggtatcgcctgaagatgtggaatatttcaactgc
caacaggagctggcttcagagctgaacaaacagtatcaaattgtggagagagtaattgct
gtgaagaccagcaagactgcgacggggcatgctgacttcccagcaaacagtcgcaaaaca
tcctcaaatgaccccgaatacctgtgcaagtggatggggctgccctatgcagagtgcagc
tgggaagatgaagctctaataagcaagaaatttcagcactgcattgacagcttcaacaac
cgtaacaactccaagacgattcctacccgggactgcaaggtattgaagcagagaccaaga
tttgttgccttgaagaaacagccttcttatattggcagtgagaacctggagctgcgagat
taccagctggagggcctcaattggctggctcactcgtggtgcaagaacaacagtgtgatc
ctggctgatgaaatgggcctggggaagacgattcagacaatctcattcctgtcgtacctt
ttccaccagcaccagctgtacggtcccttcctggtggtggttcctctgtcgactctcacc
tcgtggcagagagagtttgaagtgtgggcacctgagatcaacgtggtggtttacatcggt
gacctcatgagcaggaacatgatacgtgagtatgagtggatccactctcagtctaaaagg
ttgaaattcaacgcgcttatcacaacatatgagatcctcctcaaagacaaggctgttttg
ggaagtattagctgggcctttctaggcgtggatgaagcccatcgtttgaaaaatgatgac
tctttgctgtacaaaacactgattgacttcaagtccaaccacaggctgctgatcactggc
actccgcttcaaaattcactcaaagagctctggtccctgctgcatttcatcatgcctgag
aagtttgagttctgggaagattttgaagaagatcatgggaaaggtagagaaaatggctac
cagagccttcacaaagtcctggagccgtttctcctacgcagagtgaagaaggatgtagag
aaatctttgccagccaaagtggagcagatcctccgtgtggaaatgtctgctttgcagaag
cagtattacaagtggattctgacaagaaactacaaggctctttcaaagggaacaagagga
agcacgtctggtttcttaaacatcgtgatggagttgaaaaagtgctgcaaccactgctac
cttatcaaacctcccgaggaaaatgagagagagaatggcactgagaccctgcagtctctg
attaggagcagtgggaagctaattctcttggacaagctgctgaccaggctgcgggacaga
ggcaacagagtcctgatcttctcccagatggtgaggatgctggacatcttggcagagtac
ctgactatcaaacactatcctttccagcgcttggacggctcaatcaaaggggagatccga
aagcaggcgctggaccatttcaacgccgacggctctgaggacttctgtttcttgctgtca
acacgagctggagggctgggaattaatttggcctctgctgatactgttgttatctttgat
tcggactggaacccccagaatgatcttcaggctcaggctcgggctcatcgcattggacaa
aagaaacaggtgaatatttaccgcctggtcacaaagggtacagttgaggaggagatcatt
gagagggccaagaagaaaatggtgctggatcatttggtgatccagcgtatggacaccact
ggacggactgttctggacaacaactctggacgatccaattcaaatcctttcaacaaagaa
gagttgacagctattttgaagtttggagctgaagatctctttaaggagcttgaaggggaa
gagtcagagcctcaggagatggacattgatgagattctgcgtttggctgaaacacgagag
aatgaagtgtccaccagtgccactgatgagctgctttcacagttcaaggtggcgaacttt
gcaaccatggaggaggaagagacagagttggacgagcggccccagaaggactgggacgat
atcattccagaggagcagaggaagaaagtggaggaggaagaaaggcagaaagaattggag
gaaatctacatgctgcctcgcatccggagctcaacgaaaaaggctcaaacgaacgacagt
gaatcagatgcagagacaaagagaaggcttcaaagatcatcggggtcagaaagtgagact
gatgataccgatgatgagaagagaccaaagcgccgtggacgccctcggagcgttagaaaa
gatactgtggaaggatttactgatgctgaaatccggaggtttatcaaggcttacaagaag
tttggactgcctcttgagcggctggagtgcattgccagggatgctgagctggtggacaag
tctgtggctgatctgaagcgtttaggagaactcatccacaacagctgtgtgtcagcgatg
caggaatatgaggagcagctgaaagaaaacccaggtgaaacaggaaaaggacctgggaaa
agaagagggcctaccatcaagatctctggtgtccaagtgaatgtgaaatccatcatccag
cacgaagaggagtttgaaatgctgcataaatccatccctgcagacccagaagaaaggaag
aagtaccgcctgacgtgccgtgtcaaagctgcccattttgatgtagactggggagtggag
gaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgggaactaatt
aaaacagatccggaattgaagttatctgataagatcctgcctgttgagacagataagaaa
cctcagggaaaacagctccagacccgagttgattatctactgaaactgctgaagaaggat
ctggagaagaaagaaaatatgaaagatggggaagagggcaagctaaagaagaggaaacca
cgagtaaagaaagagaacaaggctcccaaagtcaaagatgagcatgggaacgaactctcc
cctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggatgatggcttggac
aagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaataaggaaaaacag
acaagcactaagaaggagaaggaaagtgataaagagaaaaagaggacaaaagagaagaaa
gagaagcctaaaggtggtgaagccaaatctggaagtaaagggaagagatcacaaggtcct
gtccacattacagcagggagtgaaccagtccccattggagaagatgaggatgatgatctg
gaccaagaaacattcagcatatgcaaggaaaggatgagaccagtaaaaaaagcactgaag
caacttgataagcctgataagggactgacggttcaagaacagctggagcacacacgcaac
tgcctcctaaaaattggggaccgcatctctgagtgccttaaagcctacactgaccaggat
cttatcaagctatggagaaggaacctatggatatttgtctccaagttcacagaattcgat
gccagaaaactgcacaaactctacaagatggctcataagaaaagatcgcaggaagaggag
gagcagaaaaagaaagaggacatggccagcatgcccagcatgaagaagccgttccgccca
gagccttcgggctccagccgtgatcccaccatgtcccagtctcacgtgcctcacaatcct
cattcccagaagctccacatgcccccttcccatgcccagcagcagatgcacgggcaccca
cgtgaaagctatggccatccccccaagagacacttcagcaacacggaccgaggagagtgg
cagcgagatcgaaagttcagctatagcggcaacagcaaccagatgtggggtggggaacgg
catcaccaatatgagcagcactggtacaaggaccaccactatggggaccggcgatctcgc
ggagacccccaccggagctctgggaactacagaccaaataacctctcccgcaagaggccg
tacgagcagtacagcagcgaccgagaccatagaggccaccgggattattatgacaggcac
caccacgactccaagcgccggcgatccgatgagttcaggcctcagaattaccaccagcag
gatttccgacggatgtctgatcacaggccgcccatgggataccatggccaaggaccttcg
gaccactacaggtccttccacacagacaaaccgggagactacaaacagccccttcctcca
cctcacccttcagtgtcggaccctcgctcgcccccctctcagaaatctcctcatgattcc
aagtcgcctctcgatcacaggtcgcctctggataggtcgctagaacagaaaaacaatcca
gactataactggaacatgaggaaaacgtaa
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integrated database retrieval system
