Coturnix japonica (Japanese quail): 107319092
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Entry
107319092 CDS
T04297
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107319092 (CTCF)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107319092 (CTCF)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107319092 (CTCF)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107319092 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
107319092
NCBI-ProteinID:
XP_015729153
LinkDB
All DBs
Position
11:complement(1440014..1465498)
Genome browser
AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDEACHIAPNQADGGEVVQDVNSGVQM
VMMEQLDSTRVQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEPEAPAPPPSKKRRGRPPGKA
ATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaagcagttgaagccattgtggaggaatctgaaacttttattaaggggaag
gagcgaaaaacctatcagagacgccgcgagggagggcaggaggacgaggcttgtcatata
gcaccaaaccaggcagacggaggggaagtggtgcaggatgtcaacagcggtgtacagatg
gtgatgatggagcagctggattcaactcgtgttcaaatgaagactgaagtaatggaaggt
gccgtgcctcaggaaacggaggctacggtggatgacacacagatcataacacttcaggtt
gttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagtacccgtt
ccagtgactgtacccgttgccaccacatctgtggaagaacttcagggagcttatgaaaat
gaggtttccaaaggaggcctgcaggagggagagcccatgatctgtcacaccctgccttta
ccagaaggcttccaggtcgtgaaggtgggcgctaacggtgaggtggagacactggaacaa
ggggaacttcagccacaagaagatcccaattggcaaaaagatccagactatcaaccacca
gccaaaaaaacaaagaaaaacaaaaagagtaagctccgctacaccgaggagggcaaagat
gtggatgtctctgtgtatgacttcgaggaggagcagcaggagggtttgttgtctgaggtc
aatgcagaaaaggtggtgggtaacatgaagccacctaaaccaacgaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccacgccgttccaac
ttggaccgccacatgaaaagccacactgatgaaagaccacacaagtgccatctctgtggc
agggcttttcggacagtcacgttactgaggaaccatctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggcctttgtgaccagcggagagttggttcggcat
cgccgttacaaacacacccacgagaagccgttcaaatgctcgatgtgtgactatgccagc
gtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgtccgttccag
tgcagcttgtgcagctacgccagcagggatacttacaaactgaagaggcacatgaggacc
cactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcaaagtggt
accatgaagatgcacattctgcagaagcacacagagaacgtggccaaatttcactgtcct
cactgtgatactgttatagcgagaaagagcgacttgggtgttcatttgcgaaagcagcat
tcctacattgaacagggcaagaagtgtcgctactgtgatgctgtatttcatgagcgctat
gccctcatacagcatcaaaagtctcacaagaacgagaagcgcttcaagtgtgaccagtgt
gattatgcatgcagacaggagcggcacatggtcatgcataaacggacccatactggagaa
aagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagctccttgatatg
cacttcaaacgataccacgatcccaactttgtccctgctgcctttgtctgttccaagtgt
ggtaaaacattcactcgcaggaacacgatggccagacatgctgataactgttctggctta
gatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccgaaagagg
aagatgcgctctaagaaagaagattcctctgatagtgaggaaaatgctgaaccagatttg
gacgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaagttgag
ccagaggctcctgcaccacctcccagtaagaagaggagaggaagaccaccaggcaaagct
gccacccagacaaaacaatcccagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaatcgaaaacattatagtcgaagtcaagaaagaacctgatgcagaaacagtagag
gaagaagaggaagctcagcctgctgtagtggaagctccaaatggagacctcactcctgag
atgatcctcagcatgatggaccggtga
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integrated database retrieval system
