Coturnix japonica (Japanese quail): 107319096
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Entry
107319096 CDS
T04297
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjo04812
]
107319096 (KATNB1)
Cytoskeleton proteins [BR:
cjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107319096 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_IP5PC_F
WDR54
VPS8_N
PROPPIN
Beta-prop_LRRK2
Beta-prop_WDR11_1st
WD_LRWD1
Beta-prop_VPS8
Ge1_WD40
Inhibitor_I71
Motif
Other DBs
NCBI-GeneID:
107319096
NCBI-ProteinID:
XP_015729167
LinkDB
All DBs
Position
11:1955553..1972698
Genome browser
AA seq
658 aa
AA seq
DB search
MAAAVVTKTAWKLQEIVAHSSNVSSLVLGKSSGRLLATGGDDCRVNVWSVNKPNCVMSLT
GHTTPIESLQISANEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV
ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
VMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCVLFN
PDGCCLYGGFQDSLRVYGWEPERCFDVVLVNWGKVADLCICNNQLIGVSFAQSTVSSFVV
DLSRVTRSGLVPHGLLRSNEPLAQPTPTGSSLRRSYDRPSTSCSKPQSRVKRSSESERRS
PSSDEDRDEKESKAEIQNPEDYKEIFQPKNVISRTPPHTNEPFPAPPEDEPVTAKEAVKP
IQPVEVQTPMPKQELPESFQRPPIASSTPMPRAEPSVIPAARNEPIGLKASDFLPALKNQ
SQAELVDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDIKNSVDSAVATNDLSVV
VDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDISREERLHKCKLCYKQLKNISNIVKNRSGLSGRHGSAFRELHLLMTVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccgtcgtcaccaagacggcctggaagctgcaagagatcgtggctcacagc
agcaacgtgtcctcgttagtcctggggaagagctcgggccggctgctggcaactggagga
gatgactgtcgggtcaacgtgtggtcagttaacaagcccaactgcgtcatgagcttgaca
ggccacacaacacccattgagagcctacagatcagtgccaacgaggagctcattgttgca
gggtcccagtcagggtccattcgagtctgggacctggaagctgccaaaattctccgtaca
ttgcttggtcacaaagcaaacatctgcagccttgacttccatccttacggaagttttgtg
gcatctggctctttagatacagacattaagctctgggatgtacgaaggaaaggctgcatc
ttcaaatataagagtcacacacaagcagtgagatgccttcgatttagtcctgatggcaag
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctgactgctgggaag
gtaatgttcgagtttacagggcattctggcccagtcaatgttgttgaattccatcccagt
gaataccttttggcttccggcagctctgacaggaccattcgtttctgggacttggagaag
tttcacgttgtgagctgtattgaagaggaggctactccagtcaggtgtgttcttttcaac
ccggatggctgctgcttgtatggaggcttccaggattctctgcgtgtgtacggctgggag
ccagagcgttgttttgatgtggtcttggtgaactggggaaaagtagctgatttatgtatc
tgcaacaaccagctgataggagtttcctttgcacaaagcacggtctcttcctttgttgtg
gatctcagtagagtgacaaggtcaggtttggttcctcatgggctgctcaggagcaacgaa
cctctggctcagcccacccccacagggtcctcccttcgtcgcagctatgacagaccctca
actagctgcagcaaacctcagagcagggtaaagcgcagttcagagagcgagaggcgcagt
cccagcagtgatgaggaccgggatgagaaggaatccaaggctgagatccagaatccagag
gattacaaagagatcttccagcccaagaatgtcatctctcgaactcctcctcataccaat
gagccctttccagcccccccagaggatgagccggtaactgcaaaggaagcagtgaagcct
atccaacctgtggaagtccagaccccgatgccaaagcaagagcttcctgagtcatttcag
aggccaccaattgcttcctcaactcctatgcccagggcagagccatcagttattcctgca
gccagaaacgagcccattggcctgaaagcttctgacttcctaccggctctcaaaaaccaa
agccaggctgagctcgtggatgaagaaatcatgtcccaaatcaggaaaggccacaagact
gtgtgcatggtgctcaccagccgccacaagaatctggacactgtgcgggccgtgtggagc
accagtgacatcaagaactccgtggactctgctgtagcaaccaatgacctgtctgttgtt
gtggacctcttgaacattgtcaaccaaacagcgtcactctggaagttggatttatgcact
gtagttctgcctcaaatagaaaaacttctccaaagtaaatatgaaagctatgtgcaaacg
ggctgcacctccttgaaactcattctgcagagattcctgcccctgatcacggacatactt
gctgcgccaccttctgtaggagtggacatctctagagaggagaggctccataaatgcaaa
ctgtgctacaagcaactgaaaaacatcagtaatattgtgaagaacaggtctgggctcagc
ggccgccatggtagtgccttcagagagctgcatctcctcatgactgtgctggagtga
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