Coturnix japonica (Japanese quail): 107319245
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Entry
107319245 CDS
T04297
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X3
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107319245 (TDRD12)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107319245 (TDRD12)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107319245 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
107319245
NCBI-ProteinID:
XP_015729414
LinkDB
All DBs
Position
11:8568433..8589558
Genome browser
AA seq
1189 aa
AA seq
DB search
MEVFVLRIEDPGCFWVTMKGCGPHVVEEIEYEKLNAEMNQFYDKAYEDEVKPITLEKNQL
CVVFSEELKCWCRAVVKSIMYCADYYQIECFLVDYAKYTFVKSKDVRVAMEKFTQIPFRA
KKCRLYCTKPVTLRVNFCEDTAKIVPAKRWDNAATWYFQSLLKATTQIKAKLCSVEGDIF
HVILYVTVEDEKVCINDDLVLKNFARFEEARENIPSPAKEQDNLTSLNIVSPPVEIINPA
LAFRPVRLQENVPKNLEAGHTVSSSSLEKTYKRSDKDLNENNESRFQNLSEERSFVFLSN
KIEPTPVLEKAPLHDSLKKELAQDMFLGPNFTESYCWPAVARGCDVVAISYQGNDPFIYI
PPVLTILQVESCYKALPKRNGPLVLILCPGWRKAQLVFELLKKYSRCSRMLHPVLIILGN
NKEEAETAKIQGCEIIVTTPYSLLRLYEYHILMFSGLSHLILDEMEVLFSEAAEQVFVIL
NYYKKGRITEEWKYPPRQIIAVGTRWNKHVGSLIKEFMNDPYIVITALEEASIFGNVQQV
VQHCVSSERIAVLLKMMDFTPNNLQKVLVFTNSIDEVEIVHKALKRNSIFAFKIHKEMEF
NIKGFLEHWTKSYGSGSRVVLVLTDDCMQFLEITDASCVIHFSFPSSPIIFGRRLYSMSD
NFYNVIKDSSDQDCLQARSVIMLTETSECHTVGILRYLEHAEADIPPGLAGVLEAEEKKK
FARPLCTYLKMFGTCKNRTVCPDRHQINLQVDMLQNMPSKPIQTSGYVTVLPLHIVNATN
YFGRIVDKHEDQYTILAEEINEYFKETSNRVAVQKVEKLALYGFCEETVFHRVQVVETSS
KEEENFNIKIEYIDEGRTSQVQSSQLLHLPARFQHLPPQAVEFVVCRVKPIDNDTEWNPR
VTHRIRKKIERKPHEAKVVLTLGNTVWIDPMVRVTRLSDLKMYVNEYSVRSEILSTGLGT
DNPEHILQLQKLCEHMKVSSHTKDLEPLSIKEDAASPENVSELQSLSLLGNSSENCNSSE
VIIGNHPCDGIAQTKEAEEAGDSSLDQQKCFYPEIKWFENEEAVTVKVQIARIDDYKCEF
LKEKVIFSACSEGKFYLADMELCQCILTEKSMCVIKDKEAVIVLRKEKRGAWCKLLKNKN
PHVSFDFEYWEDFEDKSPFPVGTKKLHCAAAEMEELADSSEDSDAESDE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttcgtattacgaattgaagatccaggctgcttttgggttactatgaaagga
tgtgggcctcatgtcgttgaggaaatagaatatgaaaagctgaatgcagaaatgaatcaa
ttctatgacaaagcttatgaagatgaagtaaagccaataacattagaaaaaaaccagctt
tgtgtggttttcagcgaggagctgaagtgctggtgtagagcggttgttaagtctatcatg
tactgtgcagactattatcaaatagaatgttttctagtggattatgcaaaatatactttt
gttaaatcaaaggatgttcgagttgcaatggaaaaatttacacaaatcccatttagagca
aaaaaatgtagattgtattgcacaaagccagtgacattgcgtgtcaacttctgtgaagat
acagcaaaaatagtaccagccaaaagatgggataatgctgctacgtggtattttcaaagt
cttctgaaagcaactacccaaatcaaagcgaagttatgttctgtggaaggtgatatattt
catgttattctttatgtgacggtagaagatgaaaaggtatgcattaatgatgatcttgtg
ttaaagaactttgctcgttttgaggaagctagagagaatattccaagtccagcaaaagaa
caagataacctgacatcattaaatattgtttctcctccagtagaaatcattaatccagca
cttgctttcaggccagtgcggttgcaagagaacgtaccaaagaatcttgaagcaggtcat
actgtgtccagttcctctcttgaaaaaacatacaaaaggtcagacaaggatctgaatgaa
aataatgaatctagatttcaaaaccttagtgaagaacgaagctttgtctttcttagcaac
aaaattgagccaactccagttttggaaaaagcaccacttcatgatagtctgaaaaaggaa
cttgctcaggatatgtttttaggccctaacttcacagaatcttactgttggccagcagta
gctcgaggatgtgatgtagttgccatctcctatcaaggaaatgaccctttcatatatatc
ccaccagtccttactatcttgcaagtggaaagctgctacaaagccttgccaaaaaggaat
ggaccactggtgcttattttatgtcctggttggaggaaggcacagcttgtttttgagtta
ctgaaaaagtacagcaggtgctccaggatgcttcatccagtgttgataatacttgggaat
aacaaagaagaagctgaaacggcgaaaatccaaggatgtgaaataattgtgactacacca
tacagccttctgagattgtatgaatatcacattttaatgttttctggactcagccatctt
attttggatgaaatggaggtactattctctgaagctgctgaacaggtttttgttatactg
aattactacaagaaaggccgcattactgaggaatggaaatatccaccacgtcaaattatt
gctgttggaactcggtggaataaacatgtaggaagtttaataaaggagttcatgaatgat
ccttacattgtgataacagctttggaagaagcttccatttttggaaatgtgcaacaggtt
gtgcagcattgtgtgagcagtgagagaattgctgtgttactcaaaatgatggattttacc
cctaataatcttcagaaggtgctggttttcacgaattccatagatgaagtagaaatagta
cataaggcactgaagagaaattcaatatttgccttcaaaatacataaagagatggagttt
aatatcaagggtttcttagaacattggacaaaaagctacggcagcggcagtcgtgttgtg
ttagttctgacagatgactgcatgcagttcttggagattacagatgcatcttgtgtgata
catttcagttttccttcttctccaataatcttcggtcggcgtctatacagcatgtctgac
aacttctataatgtgataaaggattcatctgatcaagactgtctacaggcaaggtcagtc
ataatgttaacagaaaccagtgagtgccatactgttggtatcctgcgttatttggagcat
gctgaagctgacattccaccaggactggctggggtgctagaagctgaagaaaagaagaag
tttgcacggccgttgtgcacctaccttaaaatgtttgggacttgcaagaatagaacggtg
tgtccagatcgtcatcaaattaatttacaagtagacatgctccagaatatgccatctaaa
cctatacagacttctggatatgtgactgtactgcctctccatattgtaaatgcaacaaac
tactttggtcgtatagtagataaacatgaggaccaatataccattcttgctgaagaaatc
aatgagtattttaaggaaacgagcaatagagttgctgttcaaaaggtagagaagctagct
ttgtatggattctgtgaggaaacagtctttcacagggttcaggtggtagagacttcttca
aaagaagaagaaaattttaacatcaaaattgagtacatagatgaaggcaggaccagtcaa
gttcaaagctctcagcttcttcacttacctgcaagatttcagcatctgccacctcaggct
gtggaatttgtagtttgtagagttaaacccattgataatgacacagaatggaacccaagg
gtaactcatcgtattcgtaagaaaattgaaagaaaacctcatgaagcaaaggtagtgctt
actttaggaaatacagtatggattgacccaatggtccgggttaccaggctttcagatttg
aagatgtatgtcaatgaatacagcgtgcgatctgagattttgtctacgggtctgggaact
gataatccagaacatatattgcaacttcagaagttgtgtgagcacatgaaggtatcaagt
cacacaaaggatttggagcctttaagcataaaggaggatgcagctagtcccgagaatgtc
tctgaactgcagagcttgtccttactgggaaattcttcagaaaactgtaattcttctgaa
gtgattataggaaatcatccgtgtgatggtattgctcaaactaaggaagcagaggaagca
ggagactcttcactggatcagcagaaatgtttctatccagaaataaaatggtttgaaaat
gaagaggctgttacagtgaaggttcaaatagcaaggatagatgactataaatgtgaattc
ttgaaggagaaggtaattttcagtgcttgctcagaaggcaaattttacttggctgatatg
gagttgtgtcagtgtatacttacagagaagtctatgtgtgtgattaaggataaagaggct
gttattgtcctcagaaaagagaaaagaggagcatggtgcaagttactaaagaacaagaat
cctcacgtgtcttttgactttgaatactgggaagattttgaagacaaaagcccttttcca
gttggtactaaaaagctgcactgcgctgctgcagagatggaagaactggctgactcttcg
gaagacagcgatgcagaaagtgatgagtaa
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