Coturnix japonica (Japanese quail): 107319275
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Entry
107319275 CDS
T04297
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107319275 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107319275 (VPS35)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107319275 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
107319275
NCBI-ProteinID:
XP_015729453
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All DBs
Position
11:6632615..6653265
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AA seq
798 aa
AA seq
DB search
MVRPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNKLGELRTSML
SPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVY
VKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISD
SMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERY
KQIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNI
IIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLRL
KHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAED
PDPEDFADEQSLVGRFIHLLRSDDPDQQYKILNTARKHFGAGGNQRIRFTLPPLVFAAYQ
LAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLR
LRRESPESEGPIYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccaacaacacagcaatcccctcaggatgaacaggaaaagctcctggatgaa
gccattcaggctgtgaaggtgcagtctttccaaatgaagagatgcttggacaaaaacaag
ctcatggatgctttgaaacatgcttccaacaagctcggtgagctgcggacttctatgtta
tctcctaagagctattatgagctctacatggcaatttctgatgagctacactacctggaa
gtctacctgacagatgaatttgccaaaggaaggaaagtggcggacctttatgagctagtg
cagtatgctggaaacattattccaagactgtatctcctaataacagtaggtgttgtatat
gtcaagtcatttccacagtccaggaaagatattttgaaagacttggtggagatgtgccgt
ggagtacagcatcctcttagaggcctctttcttcgcaactatctcctgcagtgcaccagg
aatattttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgat
tctatggactttgtgctgctgaactttgctgagatgaacaaactttgggtgcggatgcag
caccagggccatagtagggacagagaaaagagagagcgggaaaggcaggaactgagaatc
ctagtaggaaccaaccttgttcgtctcagtcagctggaaggtgttaatgtggaacgatat
aagcagattgttctgcctggaatattggagcaggttgtaaactgtagagatgctttagct
caggagtacctcatggagtgtatcatacaggttttcccagatgaatttcatctccaaaca
ttgaacccatttctcagagcttgtgctgagctgcaccaaaatgttaatgtgaaaaacata
ataattgctttaattgacaggttagctttatttgcgcatcgtgaagatggacctggtatc
ccagcagatatcaaactgttcgacatcttttcacagcaggttgctactgttatacagtct
cgtcaggacatgccctcagaggatgtcgtatccttgcaagtttctctcattaacttagct
atgaagtgctacccagaccgtgttgactatgttgataaggtgttggagacgactgtagaa
atattcaataaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctg
accagacttctgaaaatccctgttgacacttacaacaatatactgacagttttgagacta
aaacatttccaccccctgtttgagtactttgattacgagtccaggaagagcatgagttgt
tacgtgcttagcaatgtgttggattataacacagaaattgtgtcccaagaacaggttgat
gctatcatgaatttggtatccacactgatccaggatcagccagatcagcctgctgaagac
cctgaccctgaggactttgctgatgagcagagtcttgtgggaagatttattcatcttttg
cgttcagatgaccctgaccaacagtataagatcttaaacactgctcgaaaacactttggt
gcaggtgggaaccaacgtattcgttttacgctgccgccattggtttttgcagcataccag
cttgcttttcgctacaaggagaactccaaagtggatgacaaatgggagaagaagtgccag
aaaatcttctcatttgctcatcagaccatcagtgctttaatcaaagcagagttggcagag
ctgcctcttcgtctcttcctacaaggagcgctggctgcaggagagattggctttgagaat
catgaaactgtggcctatgaattcatgtcccaggctttctctctgtatgaagatgaaatt
agtgattcaaaggcacagctggctgcaatcacgttgataattgggacgtttgagaggatg
aagtgcttcagtgaggagaaccatgagcctctgaggactcagtgtgcattggcagcctct
aagctcctcaagaaaccagaccagtgccgggctgtgagtacttgtgctcatctgttctgg
tctggtcgaaacactgacaagaatggagaggagcttcatggaggaaagagagtgatggag
tgtctgaagaaggctttaaaaatagcaaatcagtgcatggacccttctcttcaagtccaa
cttttcatagaaattctaaacagatacatctatttttacgaaaaggaaaatgaggcagtt
acaattcaagttttgaatcaactgatacaaaagataagagaagatcttccaaacctcgaa
tctactgaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgt
ctgaggagggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttaa
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